Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.15□□□□□ -1.75
KRT3P12035 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.15□□□□□ -1.75
KRT3P12035 AC023825.1-201ENST00000566704 1030 ntBASIC4.15□□□□□ -1.75
KRT3P12035 AC010735.1-201ENST00000567305 1026 ntBASIC4.15□□□□□ -1.75
KRT3P12035 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.15□□□□□ -1.75
KRT3P12035 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.15□□□□□ -1.75
KRT3P12035 AP001180.3-201ENST00000582221 145 ntBASIC4.15□□□□□ -1.75
KRT3P12035 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
KRT3P12035 AC006116.7-201ENST00000590141 756 ntBASIC4.15□□□□□ -1.75
KRT3P12035 AC069304.3-201ENST00000603938 1084 ntBASIC4.15□□□□□ -1.75
KRT3P12035 uc_338.32-201ENST00000615087 172 ntBASIC4.15□□□□□ -1.75
KRT3P12035 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.15□□□□□ -1.75
KRT3P12035 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.15□□□□□ -1.75
KRT3P12035 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.15□□□□□ -1.75
KRT3P12035 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.15□□□□□ -1.75
KRT3P12035 AP002001.2-201ENST00000529025 1469 ntBASIC4.15□□□□□ -1.75
KRT3P12035 AC027287.1-201ENST00000553115 1453 ntBASIC4.15□□□□□ -1.75
KRT3P12035 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
KRT3P12035 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.15□□□□□ -1.75
KRT3P12035 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.14□□□□□ -1.75
KRT3P12035 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.14□□□□□ -1.75
KRT3P12035 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.14□□□□□ -1.75
KRT3P12035 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
KRT3P12035 UBE3AP2-201ENST00000429033 2259 ntBASIC4.14□□□□□ -1.75
KRT3P12035 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT3P12035 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT3P12035 XIAPP3-201ENST00000312918 795 ntBASIC4.14□□□□□ -1.75
KRT3P12035 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT3P12035 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.14□□□□□ -1.75
KRT3P12035 AC068538.1-201ENST00000376856 336 ntBASIC4.14□□□□□ -1.75
KRT3P12035 SNORD65C-201ENST00000390962 71 ntBASIC4.14□□□□□ -1.75
KRT3P12035 AL603865.2-201ENST00000401679 213 ntBASIC4.14□□□□□ -1.75
KRT3P12035 RNA5SP317-201ENST00000410176 116 ntBASIC4.14□□□□□ -1.75
KRT3P12035 Y_RNA.625-201ENST00000411256 107 ntBASIC4.14□□□□□ -1.75
KRT3P12035 RNA5SP311-201ENST00000411290 116 ntBASIC4.14□□□□□ -1.75
KRT3P12035 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.14□□□□□ -1.75
KRT3P12035 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT3P12035 AC114755.5-201ENST00000447760 831 ntBASIC4.14□□□□□ -1.75
KRT3P12035 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.14□□□□□ -1.75
KRT3P12035 HMGB3P22-202ENST00000451823 572 ntBASIC4.14□□□□□ -1.75
KRT3P12035 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.14□□□□□ -1.75
KRT3P12035 AC018635.1-201ENST00000468292 1030 ntBASIC4.14□□□□□ -1.75
KRT3P12035 AC110792.1-201ENST00000491826 472 ntBASIC4.14□□□□□ -1.75
KRT3P12035 AC020593.1-201ENST00000507399 299 ntBASIC4.14□□□□□ -1.75
KRT3P12035 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.14□□□□□ -1.75
KRT3P12035 RNA5SP315-201ENST00000516340 116 ntBASIC4.14□□□□□ -1.75
KRT3P12035 RNA5SP312-201ENST00000517068 116 ntBASIC4.14□□□□□ -1.75
KRT3P12035 IGHV3-32-201ENST00000519182 355 ntBASIC4.14□□□□□ -1.75
KRT3P12035 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.14□□□□□ -1.75
KRT3P12035 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.14□□□□□ -1.75
KRT3P12035 AL442163.2-201ENST00000553912 710 ntBASIC4.14□□□□□ -1.75
KRT3P12035 AC126365.2-201ENST00000580630 379 ntBASIC4.14□□□□□ -1.75
KRT3P12035 AC018645.2-201ENST00000609151 472 ntBASIC4.14□□□□□ -1.75
KRT3P12035 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.14□□□□□ -1.75
KRT3P12035 AC119744.1-201ENST00000454746 1715 ntBASIC4.14□□□□□ -1.75
KRT3P12035 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
KRT3P12035 DCAF13P3-201ENST00000561147 1334 ntBASIC4.14□□□□□ -1.75
KRT3P12035 AL627171.1-201ENST00000618845 1308 ntBASIC4.14□□□□□ -1.75
KRT3P12035 AC073055.1-201ENST00000456901 1621 ntBASIC4.13□□□□□ -1.75
KRT3P12035 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRT3P12035 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
KRT3P12035 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.13□□□□□ -1.75
KRT3P12035 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRT3P12035 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
KRT3P12035 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
KRT3P12035 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.13□□□□□ -1.75
KRT3P12035 RNU6-207P-201ENST00000384137 107 ntBASIC4.13□□□□□ -1.75
KRT3P12035 MIR620-201ENST00000385232 95 ntBASIC4.13□□□□□ -1.75
KRT3P12035 RPL21P65-201ENST00000406094 466 ntBASIC4.13□□□□□ -1.75
KRT3P12035 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.13□□□□□ -1.75
KRT3P12035 AL024507.1-201ENST00000412741 274 ntBASIC4.13□□□□□ -1.75
KRT3P12035 AMD1P2-201ENST00000412936 992 ntBASIC4.13□□□□□ -1.75
KRT3P12035 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.13□□□□□ -1.75
KRT3P12035 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT3P12035 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT3P12035 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.13□□□□□ -1.75
KRT3P12035 ATP5HP2-201ENST00000433885 485 ntBASIC4.13□□□□□ -1.75
KRT3P12035 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT3P12035 HMGB1P45-201ENST00000435986 653 ntBASIC4.13□□□□□ -1.75
KRT3P12035 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.13□□□□□ -1.75
KRT3P12035 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT3P12035 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.13□□□□□ -1.75
KRT3P12035 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.13□□□□□ -1.75
KRT3P12035 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.13□□□□□ -1.75
KRT3P12035 RANP8-201ENST00000444720 713 ntBASIC4.13□□□□□ -1.75
KRT3P12035 TPT1P12-201ENST00000448968 492 ntBASIC4.13□□□□□ -1.75
KRT3P12035 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.13□□□□□ -1.75
KRT3P12035 SNRPGP5-201ENST00000456003 220 ntBASIC4.13□□□□□ -1.75
KRT3P12035 GTF2IP12-201ENST00000456547 356 ntBASIC4.13□□□□□ -1.75
KRT3P12035 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.13□□□□□ -1.75
KRT3P12035 AC012170.1-201ENST00000495139 359 ntBASIC4.13□□□□□ -1.75
KRT3P12035 FTH1P24-201ENST00000503502 462 ntBASIC4.13□□□□□ -1.75
KRT3P12035 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT3P12035 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT3P12035 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.13□□□□□ -1.75
KRT3P12035 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.13□□□□□ -1.75
KRT3P12035 AP003066.2-201ENST00000529375 555 ntBASIC4.13□□□□□ -1.75
KRT3P12035 HIGD1AP5-201ENST00000529959 259 ntBASIC4.13□□□□□ -1.75
KRT3P12035 AC092851.1-201ENST00000535964 478 ntBASIC4.13□□□□□ -1.75
KRT3P12035 YPEL5P3-201ENST00000547227 352 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms