Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC002553.2-201ENST00000453217 340 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 RPL7P22-201ENST00000466005 733 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AC108751.2-201ENST00000469993 231 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 RPS4XP18-201ENST00000495480 763 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SNRPA1P09661 AC008837.2-201ENST00000513076 418 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 SNORA70.11-201ENST00000515987 138 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 SNORA70.13-201ENST00000516116 138 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AC018442.3-201ENST00000523025 183 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.51□□□□□ -1.53
SNRPA1P09661 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.51□□□□□ -1.53
SNRPA1P09661 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.51□□□□□ -1.53
SNRPA1P09661 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.51□□□□□ -1.53
SNRPA1P09661 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.51□□□□□ -1.53
SNRPA1P09661 RN7SL435P-201ENST00000584418 282 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.51□□□□□ -1.53
SNRPA1P09661 RPL7P50-201ENST00000600588 727 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AC064872.1-201ENST00000604823 1072 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.51□□□□□ -1.53
SNRPA1P09661 AF246928.1-201ENST00000623768 87 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AC087821.2-201ENST00000637086 450 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AP005901.5-201ENST00000545779 1796 ntBASIC5.51□□□□□ -1.53
SNRPA1P09661 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNRPA1P09661 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNRPA1P09661 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNRPA1P09661 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SNRPA1P09661 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNRPA1P09661 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SNRPA1P09661 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AC019072.1-201ENST00000604535 1551 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.5□□□□□ -1.53
SNRPA1P09661 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNRPA1P09661 GTF2H2B-203ENST00000508065 1432 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNRPA1P09661 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNRPA1P09661 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNRPA1P09661 RNU1-20P-201ENST00000363314 162 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 RNU6-666P-201ENST00000363499 107 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 RNU6-707P-201ENST00000364647 95 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 RNU6-304P-201ENST00000364855 107 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNRPA1P09661 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNRPA1P09661 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNRPA1P09661 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SNRPA1P09661 Y_RNA.599-201ENST00000410489 109 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 RN7SKP27-201ENST00000410684 333 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 LINC01881-201ENST00000416103 412 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AC019178.2-201ENST00000423595 505 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.5□□□□□ -1.53
SNRPA1P09661 EEF1A1P1-201ENST00000447052 739 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SNRPA1P09661 MRPL42P4-201ENST00000453267 443 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 RPL5P32-201ENST00000454085 879 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC021205.1-201ENST00000468797 348 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AL132838.2-201ENST00000492041 314 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AC116353.3-201ENST00000511215 249 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AP000619.3-201ENST00000535634 1127 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC007115.1-201ENST00000546853 234 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.5□□□□□ -1.53
SNRPA1P09661 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNRPA1P09661 NIFKP8-201ENST00000560500 874 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AC012213.3-201ENST00000577199 777 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 MIR3912-201ENST00000577566 105 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 MIR3915-201ENST00000578518 97 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 MIR1254-2-201ENST00000579553 63 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.5□□□□□ -1.53
SNRPA1P09661 AC006539.2-201ENST00000601729 572 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC068790.6-201ENST00000602558 258 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC099676.1-201ENST00000608886 657 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC073114.1-201ENST00000612027 490 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC011472.4-201ENST00000615848 491 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC022509.4-201ENST00000621404 572 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AL161637.1-201ENST00000622380 412 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNRPA1P09661 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.5□□□□□ -1.53
SNRPA1P09661 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.5□□□□□ -1.53
SNRPA1P09661 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNRPA1P09661 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNRPA1P09661 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.49□□□□□ -1.53
SNRPA1P09661 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNRPA1P09661 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNRPA1P09661 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNRPA1P09661 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNRPA1P09661 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNRPA1P09661 Y_RNA.194-201ENST00000363985 102 ntBASIC5.49□□□□□ -1.53
SNRPA1P09661 RNU4-75P-201ENST00000364621 146 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms