Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNA5SP366-201ENST00000365454 123 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DOAP06340 SNORA70C-201ENST00000384538 135 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 MIR525-201ENST00000384978 85 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 MIR3065-201ENST00000390137 79 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 VDAC2P1-201ENST00000399358 958 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 DEFB108C-201ENST00000400154 252 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 RN7SKP142-201ENST00000411236 328 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC092745.2-202ENST00000411880 369 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 OR2AH1P-201ENST00000425717 928 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC002542.1-201ENST00000440683 193 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC093899.1-201ENST00000457984 376 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 AL161747.1-201ENST00000480068 358 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC147055.4-201ENST00000504399 745 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 DSTNP2-201ENST00000504533 515 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC113430.1-201ENST00000506872 718 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 PARP4P3-201ENST00000510265 317 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DOAP06340 SNORA31.9-201ENST00000516429 84 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC008083.2-201ENST00000546707 476 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 HMGB2P1-201ENST00000591146 634 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC103792.1-201ENST00000603591 919 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC018714.1-201ENST00000605028 208 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC008966.2-201ENST00000606157 453 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AL451074.6-201ENST00000608512 729 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC015540.1-201ENST00000615828 501 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC121761.2-201ENST00000617300 689 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC073534.2-201ENST00000620377 381 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC068724.3-201ENST00000625906 87 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 AC140479.6-201ENST00000633535 357 ntBASIC5.26□□□□□ -1.57
HLA-DOAP06340 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DOAP06340 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DOAP06340 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HLA-DOAP06340 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HLA-DOAP06340 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DOAP06340 MTND4P31-201ENST00000425607 1343 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DOAP06340 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DOAP06340 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 MIR331-201ENST00000362302 94 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DOAP06340 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DOAP06340 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 Y_RNA.516-201ENST00000384541 124 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 SNORA11F-201ENST00000408237 128 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 RNA5SP80-201ENST00000410475 111 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 USP9YP33-201ENST00000412220 421 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 NRBF2P2-201ENST00000413087 861 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC234781.4-201ENST00000419384 244 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 OR6K4P-201ENST00000423179 955 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 MTND2P20-201ENST00000440805 661 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DOAP06340 BMI1P1-201ENST00000445879 941 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 KATNBL1P6-201ENST00000453433 915 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 RPS7P7-201ENST00000463499 571 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC037198.2-201ENST00000478845 733 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 RPL7P18-201ENST00000478965 734 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC105137.1-201ENST00000484355 562 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC004069.2-201ENST00000505438 1114 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC008885.2-201ENST00000509506 930 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC079140.3-201ENST00000511111 550 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 MRPL49P2-201ENST00000521066 465 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC008126.1-201ENST00000549019 480 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AL109766.1-201ENST00000555080 552 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC079171.1-201ENST00000568788 914 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC079587.1-201ENST00000603846 277 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 RBM11P1-201ENST00000604951 799 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC108747.1-201ENST00000609508 535 ntBASIC5.25□□□□□ -1.57
HLA-DOAP06340 AC097505.1-201ENST00000610199 565 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms