Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC027290.2-201ENST00000623210 18662 ntBASIC3.85□□□□□ -1.79
COL4A1P02462 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
COL4A1P02462 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
COL4A1P02462 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.85□□□□□ -1.79
COL4A1P02462 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL4A1P02462 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
COL4A1P02462 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
COL4A1P02462 AL353692.2-201ENST00000407054 335 ntBASIC3.84□□□□□ -1.79
COL4A1P02462 AL592148.1-201ENST00000413568 445 ntBASIC3.84□□□□□ -1.79
COL4A1P02462 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.84□□□□□ -1.79
COL4A1P02462 SNORA70.19-201ENST00000516717 90 ntBASIC3.84□□□□□ -1.79
COL4A1P02462 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.84□□□□□ -1.79
COL4A1P02462 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.84□□□□□ -1.79
COL4A1P02462 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.84□□□□□ -1.79
COL4A1P02462 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL4A1P02462 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL4A1P02462 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
COL4A1P02462 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL4A1P02462 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC3.84□□□□□ -1.79
COL4A1P02462 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL4A1P02462 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL4A1P02462 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL4A1P02462 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.84□□□□□ -1.8
COL4A1P02462 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
COL4A1P02462 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.84□□□□□ -1.8
COL4A1P02462 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
COL4A1P02462 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.84□□□□□ -1.8
COL4A1P02462 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC3.84□□□□□ -1.8
COL4A1P02462 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.84□□□□□ -1.8
COL4A1P02462 RPL7P47-201ENST00000497299 556 ntBASIC3.84□□□□□ -1.8
COL4A1P02462 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.84□□□□□ -1.8
COL4A1P02462 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.84□□□□□ -1.8
COL4A1P02462 AC009812.2-201ENST00000517657 457 ntBASIC3.84□□□□□ -1.8
COL4A1P02462 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.84□□□□□ -1.8
COL4A1P02462 AC135001.1-201ENST00000544546 283 ntBASIC3.84□□□□□ -1.8
COL4A1P02462 uc_338.32-201ENST00000615087 172 ntBASIC3.84□□□□□ -1.8
COL4A1P02462 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
COL4A1P02462 HSPA8P1-201ENST00000425843 1833 ntBASIC3.83□□□□□ -1.8
COL4A1P02462 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL4A1P02462 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
COL4A1P02462 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL4A1P02462 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
COL4A1P02462 AC083843.2-201ENST00000568248 6253 ntBASIC3.83□□□□□ -1.8
COL4A1P02462 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.83□□□□□ -1.8
COL4A1P02462 EEF1A1P41-201ENST00000414667 207 ntBASIC3.83□□□□□ -1.8
COL4A1P02462 AC093156.1-201ENST00000440382 670 ntBASIC3.83□□□□□ -1.8
COL4A1P02462 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.83□□□□□ -1.8
COL4A1P02462 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.83□□□□□ -1.8
COL4A1P02462 AC087312.1-201ENST00000471411 480 ntBASIC3.83□□□□□ -1.8
COL4A1P02462 RNA5SP356-201ENST00000515972 94 ntBASIC3.83□□□□□ -1.8
COL4A1P02462 AP005205.1-201ENST00000563503 508 ntBASIC3.83□□□□□ -1.8
COL4A1P02462 BMS1P21-201ENST00000634565 365 ntBASIC3.83□□□□□ -1.8
COL4A1P02462 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL4A1P02462 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.83□□□□□ -1.8
COL4A1P02462 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.83□□□□□ -1.8
COL4A1P02462 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL4A1P02462 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
COL4A1P02462 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A1P02462 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A1P02462 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.82□□□□□ -1.8
COL4A1P02462 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A1P02462 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
COL4A1P02462 SNORA48.8-201ENST00000391324 134 ntBASIC3.82□□□□□ -1.8
COL4A1P02462 RN7SKP220-201ENST00000410611 288 ntBASIC3.82□□□□□ -1.8
COL4A1P02462 GNG5P5-201ENST00000420444 220 ntBASIC3.82□□□□□ -1.8
COL4A1P02462 DUTP6-201ENST00000425573 462 ntBASIC3.82□□□□□ -1.8
COL4A1P02462 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.82□□□□□ -1.8
COL4A1P02462 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A1P02462 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.82□□□□□ -1.8
COL4A1P02462 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.82□□□□□ -1.8
COL4A1P02462 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.82□□□□□ -1.8
COL4A1P02462 CYCSP39-201ENST00000565821 309 ntBASIC3.82□□□□□ -1.8
COL4A1P02462 VN1R90P-201ENST00000595717 726 ntBASIC3.82□□□□□ -1.8
COL4A1P02462 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.82□□□□□ -1.8
COL4A1P02462 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.82□□□□□ -1.8
COL4A1P02462 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
COL4A1P02462 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A1P02462 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.82□□□□□ -1.8
COL4A1P02462 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
COL4A1P02462 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A1P02462 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A1P02462 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.82□□□□□ -1.8
COL4A1P02462 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
COL4A1P02462 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL4A1P02462 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL4A1P02462 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
COL4A1P02462 RPS24P12-201ENST00000402084 394 ntBASIC3.81□□□□□ -1.8
COL4A1P02462 AC105272.1-201ENST00000438604 198 ntBASIC3.81□□□□□ -1.8
COL4A1P02462 RPS12P18-201ENST00000442381 270 ntBASIC3.81□□□□□ -1.8
COL4A1P02462 AC068724.1-201ENST00000487100 792 ntBASIC3.81□□□□□ -1.8
COL4A1P02462 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.81□□□□□ -1.8
COL4A1P02462 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.81□□□□□ -1.8
COL4A1P02462 AC103858.2-201ENST00000621471 543 ntBASIC3.81□□□□□ -1.8
COL4A1P02462 AC244205.2-202ENST00000635781 342 ntBASIC3.81□□□□□ -1.8
COL4A1P02462 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.81□□□□□ -1.8
COL4A1P02462 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
COL4A1P02462 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.81□□□□□ -1.8
COL4A1P02462 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL4A1P02462 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
COL4A1P02462 UBE2V1P2-201ENST00000397758 440 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms