Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC090912.3-201ENST00000609775 533 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SSSCA1O60232 MIR4278-201ENST00000636094 69 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSSCA1O60232 DDX6P1-205ENST00000441966 1436 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSSCA1O60232 AC006042.3-201ENST00000454684 1469 ntBASIC2.65□□□□□ -1.98
SSSCA1O60232 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
SSSCA1O60232 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SSSCA1O60232 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SSSCA1O60232 SDCBPP3-201ENST00000419629 891 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 MTND2P16-201ENST00000419987 799 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 FAR2P4-202ENST00000425399 584 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.65□□□□□ -1.99
SSSCA1O60232 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.65□□□□□ -1.99
SSSCA1O60232 AC009969.1-201ENST00000438726 172 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 CEACAMP9-201ENST00000442990 513 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.65□□□□□ -1.99
SSSCA1O60232 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.65□□□□□ -1.99
SSSCA1O60232 APOOP4-201ENST00000513530 597 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SSSCA1O60232 RAB9BP1-201ENST00000519581 626 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 IGHV3-76-201ENST00000522465 295 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.65□□□□□ -1.99
SSSCA1O60232 AC005476.1-201ENST00000554427 397 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 MIR4286-201ENST00000580651 93 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.65□□□□□ -1.99
SSSCA1O60232 AC010680.4-201ENST00000605334 543 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 AL391497.1-201ENST00000608671 547 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 MIR7851-201ENST00000610611 160 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 AL356274.1-201ENST00000617064 410 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 AL356321.1-201ENST00000621360 228 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 MIR6830-201ENST00000636015 70 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SSSCA1O60232 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SSSCA1O60232 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.65□□□□□ -1.99
SSSCA1O60232 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SSSCA1O60232 AC005183.1-201ENST00000603687 1979 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 AC008264.2-201ENST00000610193 3731 ntBASIC2.65□□□□□ -1.99
SSSCA1O60232 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.64□□□□□ -1.99
SSSCA1O60232 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC2.64□□□□□ -1.99
SSSCA1O60232 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SSSCA1O60232 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.64□□□□□ -1.99
SSSCA1O60232 RNU1-70P-201ENST00000362618 164 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
SSSCA1O60232 BMS1P22-201ENST00000414726 313 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.64□□□□□ -1.99
SSSCA1O60232 OR2AS1P-201ENST00000427827 319 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.64□□□□□ -1.99
SSSCA1O60232 OR4C10P-201ENST00000434991 931 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 RPS29P7-201ENST00000439662 171 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 FCF1P8-201ENST00000510322 597 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 MTCO1P35-201ENST00000515270 228 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.64□□□□□ -1.99
SSSCA1O60232 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.64□□□□□ -1.99
SSSCA1O60232 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.64□□□□□ -1.99
SSSCA1O60232 CR383656.6-201ENST00000550518 394 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 AC010198.2-201ENST00000550612 259 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.64□□□□□ -1.99
SSSCA1O60232 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SSSCA1O60232 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.64□□□□□ -1.99
SSSCA1O60232 RN7SL703P-201ENST00000578485 302 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC2.64□□□□□ -1.99
SSSCA1O60232 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.64□□□□□ -1.99
SSSCA1O60232 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.64□□□□□ -1.99
SSSCA1O60232 AC015802.5-201ENST00000607478 399 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.64□□□□□ -1.99
SSSCA1O60232 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SSSCA1O60232 PLCE1P1-201ENST00000622094 305 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 AC127502.3-201ENST00000636170 1206 ntBASIC2.64□□□□□ -1.99
SSSCA1O60232 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSSCA1O60232 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SSSCA1O60232 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.64□□□□□ -1.99
SSSCA1O60232 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.63□□□□□ -1.99
SSSCA1O60232 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SSSCA1O60232 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SSSCA1O60232 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SSSCA1O60232 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SSSCA1O60232 RNA5SP119-201ENST00000362715 117 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 MIR591-201ENST00000385290 95 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 RNA5SP229-201ENST00000410809 99 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 RN7SKP58-201ENST00000411010 305 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.63□□□□□ -1.99
SSSCA1O60232 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.63□□□□□ -1.99
SSSCA1O60232 HMGB3P30-201ENST00000457863 606 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 SNORD105B-201ENST00000458770 79 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 AC092754.2-201ENST00000463506 460 ntBASIC2.63□□□□□ -1.99
SSSCA1O60232 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.63□□□□□ -1.99
SSSCA1O60232 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms