Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TMEM235A6NFC5 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.9□□□□□ -1.94
TMEM235A6NFC5 AL592494.2-201ENST00000425455 1548 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 MFSD8-233ENST00000641482 4860 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 AC090337.1-201ENST00000579651 2074 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 RPL7P26-201ENST00000333817 754 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 RPL32P3-201ENST00000359025 275 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 SNORD9-201ENST00000362566 104 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 RNU6-386P-201ENST00000362650 107 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 RN7SKP156-201ENST00000410308 342 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 HMGB3P11-201ENST00000440127 604 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 HMGB3P21-201ENST00000452483 547 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 RPS20P21-201ENST00000466859 343 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 HPRT1P1-201ENST00000509498 657 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 AC067904.2-201ENST00000517322 1283 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 HIGD1AP18-201ENST00000520730 278 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 AC068657.1-201ENST00000520807 306 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 IGHV3-76-201ENST00000522465 295 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 SMARCE1P4-201ENST00000523647 241 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 AF230666.2-201ENST00000602328 725 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 MTCO2P22-201ENST00000603246 681 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 AC107294.3-201ENST00000609211 526 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 MIR6748-201ENST00000610433 71 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 MIR6875-201ENST00000617506 72 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 XIST_intron.1-201ENST00000619444 68 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 MIR6758-201ENST00000620653 63 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 AC020763.5-201ENST00000623298 430 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 MIR6830-201ENST00000636015 70 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 AC017071.1-201ENST00000564407 2204 ntBASIC2.9□□□□□ -1.95
TMEM235A6NFC5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
TMEM235A6NFC5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 MIR320B1-201ENST00000390209 79 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 RNU6-244P-201ENST00000391028 104 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 SNORA11B-201ENST00000408175 129 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 FAR2P4-202ENST00000425399 584 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 OR4C10P-201ENST00000434991 931 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 HSFY6P-201ENST00000445573 403 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 VN1R105P-201ENST00000486595 910 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 OR5H3P-201ENST00000502817 919 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 RNA5SP380-201ENST00000517190 98 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 AC084757.1-201ENST00000559987 490 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 AGGF1P6-201ENST00000569213 976 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 AC022884.3-201ENST00000579571 248 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 C2orf27A-204ENST00000623058 969 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 AC087565.3-202ENST00000642085 1603 ntBASIC2.89□□□□□ -1.95
TMEM235A6NFC5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TMEM235A6NFC5 ELL2P4-201ENST00000446870 1376 ntBASIC2.88□□□□□ -1.95
TMEM235A6NFC5 USP8P1-201ENST00000494673 3183 ntBASIC2.88□□□□□ -1.95
TMEM235A6NFC5 AL079305.1-201ENST00000623159 3008 ntBASIC2.88□□□□□ -1.95
TMEM235A6NFC5 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TMEM235A6NFC5 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TMEM235A6NFC5 AL049693.1-201ENST00000402760 611 ntBASIC2.88□□□□□ -1.95
TMEM235A6NFC5 RSL24D1P1-201ENST00000404972 493 ntBASIC2.88□□□□□ -1.95
TMEM235A6NFC5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.88□□□□□ -1.95
TMEM235A6NFC5 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.88□□□□□ -1.95
TMEM235A6NFC5 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.88□□□□□ -1.95
TMEM235A6NFC5 AC006960.1-201ENST00000419980 153 ntBASIC2.88□□□□□ -1.95
TMEM235A6NFC5 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TMEM235A6NFC5 C4BPAP2-201ENST00000428434 478 ntBASIC2.88□□□□□ -1.95
TMEM235A6NFC5 RPL23AP69-201ENST00000431134 458 ntBASIC2.88□□□□□ -1.95
TMEM235A6NFC5 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TMEM235A6NFC5 MTCO1P45-201ENST00000431457 267 ntBASIC2.88□□□□□ -1.95
TMEM235A6NFC5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.88□□□□□ -1.95
TMEM235A6NFC5 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.88□□□□□ -1.95
TMEM235A6NFC5 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms