Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC010608.2-201ENST00000624830 470 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AL109659.3-201ENST00000624985 950 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 IQCB2P-201ENST00000401788 1633 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 AC025263.3-201ENST00000622965 1396 ntBASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.87□□□□□ -1.79
ATG4BQ9Y4P1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 OR11H4-201ENST00000315409 1082 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 SNORD35B-201ENST00000363660 87 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 RNU6-1293P-201ENST00000384077 107 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 U6.112-201ENST00000384129 70 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 SNORD65C-201ENST00000390962 71 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 RNA5SP317-201ENST00000410176 116 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 RNA5SP311-201ENST00000411290 116 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AC013262.1-201ENST00000426710 252 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 VDAC1P6-201ENST00000430062 855 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AC044797.1-201ENST00000445744 679 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AL929288.2-201ENST00000446368 407 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AL050341.1-201ENST00000447743 313 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 NDUFS5P3-201ENST00000450668 321 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 RPS7P7-201ENST00000463499 571 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 RPL21P71-201ENST00000465598 459 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 RPL29P14-201ENST00000495837 428 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AC018797.3-201ENST00000513388 1241 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 RNA5SP315-201ENST00000516340 116 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 RNA5SP312-201ENST00000517068 116 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 RN7SKP234-201ENST00000517173 224 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 MIR2116-201ENST00000517221 80 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 IGKV2-38-201ENST00000517443 247 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AP003102.1-201ENST00000525638 661 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 CYB5AP5-201ENST00000549779 389 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AC023824.3-201ENST00000569003 562 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 MIR3160-1-201ENST00000577972 85 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 MIR5684-201ENST00000585074 65 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 AL451044.1-201ENST00000604867 238 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 ZYXP1-201ENST00000617638 118 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 RNU6-156P-201ENST00000621869 107 ntBASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATG4BQ9Y4P1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 RNA5SP479-201ENST00000364858 117 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 RNU6-207P-201ENST00000384137 107 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 RNU1-13P-201ENST00000384499 162 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 MIR3074-201ENST00000384885 81 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 RNA5SP39-201ENST00000411245 120 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 HSPE1P12-201ENST00000412576 301 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC108032.1-201ENST00000416706 207 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 UBE2V1P1-201ENST00000430836 445 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AL356276.2-201ENST00000435919 558 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 RNF2P1-201ENST00000442955 1010 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 RPS4XP4-201ENST00000443195 763 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AC005002.1-201ENST00000447458 540 ntBASIC3.85□□□□□ -1.79
ATG4BQ9Y4P1 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms