Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 PSMA6P4-201ENST00000603247 718 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AC091895.1-201ENST00000624494 256 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 GOT2P1-201ENST00000440922 1309 ntBASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.99□□□□□ -1.29
VPS9D1Q9Y2B5 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 HAUS6P2-201ENST00000433254 2404 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 CASC19-204ENST00000641001 2055 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 Y_RNA.16-201ENST00000362421 102 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 RNU4-81P-201ENST00000363561 144 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 Y_RNA.383-201ENST00000383855 97 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 SNORD115-46-201ENST00000390982 71 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 RPSAP44-201ENST00000406712 884 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 RNA5SP178-201ENST00000410380 128 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 SYF2P2-201ENST00000417620 583 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AC010154.1-201ENST00000425857 269 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 RPS10P18-201ENST00000442662 495 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 CEACAMP7-201ENST00000444105 496 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 BTF3P6-201ENST00000448054 499 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 SNORA35.1-201ENST00000458908 128 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 RNU7-187P-201ENST00000458985 68 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 RN7SL834P-201ENST00000461450 286 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AC018475.1-201ENST00000478358 465 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AC108078.2-201ENST00000510750 236 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AC090615.1-201ENST00000577519 154 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AL589765.5-201ENST00000596133 515 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AC020765.1-201ENST00000604296 328 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AC073593.1-201ENST00000624500 411 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 OR52B5P-204ENST00000641744 3467 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 SAGE3P-201ENST00000619800 1635 ntBASIC6.98□□□□□ -1.29
VPS9D1Q9Y2B5 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 SPATA31C2-201ENST00000324915 3777 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 RNA5SP258-201ENST00000362750 119 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 Y_RNA.76-201ENST00000362931 109 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 Y_RNA.151-201ENST00000363566 112 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms