Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 UQCRFS1P3-201ENST00000407697 385 ntBASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 DEFB130D-201ENST00000426866 237 ntBASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 AC005008.1-201ENST00000456151 612 ntBASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 RPL23AP71-201ENST00000470966 469 ntBASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 RPS17P11-201ENST00000474297 293 ntBASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 RNU5A-7P-201ENST00000515979 116 ntBASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 COX6B1P6-201ENST00000522347 255 ntBASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 AC083923.1-201ENST00000523708 376 ntBASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 AC090751.1-201ENST00000566966 267 ntBASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SHROOM4Q9ULL8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 RNA5SP97-201ENST00000365006 84 ntBASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC234782.4-201ENST00000417646 1048 ntBASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 RPL21P23-201ENST00000446654 460 ntBASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC239809.1-201ENST00000450470 217 ntBASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC073387.1-201ENST00000453261 709 ntBASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC008565.1-201ENST00000509046 885 ntBASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC095057.3-201ENST00000567102 1157 ntBASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC022968.1-201ENST00000567372 442 ntBASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC006272.2-201ENST00000594725 163 ntBASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC009318.3-201ENST00000616916 503 ntBASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 AC078880.5-201ENST00000617845 421 ntBASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC7.4□□□□□ -1.22
SHROOM4Q9ULL8 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 ENSAP3-201ENST00000312710 333 ntBASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 MIR199A2-201ENST00000385289 110 ntBASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 ZNF602P-201ENST00000405929 924 ntBASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 TANK-206ENST00000406287 875 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 ZNF736P1Y-201ENST00000440402 1276 ntBASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 RN7SKP57-201ENST00000517248 293 ntBASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 ATP5F1P7-201ENST00000567330 760 ntBASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 AP005264.7-201ENST00000625003 745 ntBASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 AC010300.1-201ENST00000600671 5134 ntBASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 AC090971.4-201ENST00000560291 1800 ntBASIC7.39□□□□□ -1.23
SHROOM4Q9ULL8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 RNU6-1279P-201ENST00000383917 103 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 HDGFP1-201ENST00000405943 252 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 DYNLL1P7-201ENST00000429273 258 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 AC092170.1-201ENST00000440211 356 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 GEMIN8P3-201ENST00000445417 720 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 AL035404.1-201ENST00000497982 568 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 AC115085.1-201ENST00000588924 229 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 AC096586.1-201ENST00000610267 561 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 MIR7702-201ENST00000621931 59 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 AL590396.2-201ENST00000636511 1041 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 MFSD8-236ENST00000641509 4050 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 AC134882.1-201ENST00000603738 1676 ntBASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SHROOM4Q9ULL8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SHROOM4Q9ULL8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC7.37□□□□□ -1.23
SHROOM4Q9ULL8 SOD2P1-201ENST00000396543 562 ntBASIC7.37□□□□□ -1.23
SHROOM4Q9ULL8 RPS7P5-201ENST00000441482 581 ntBASIC7.37□□□□□ -1.23
SHROOM4Q9ULL8 RANP8-201ENST00000444720 713 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms