Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
CISHQ9NSE2 RNA5SP502-201ENST00000362694 119 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 RN7SKP44-201ENST00000363602 316 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CISHQ9NSE2 AP002088.1-201ENST00000382740 395 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 MIR23B-201ENST00000384832 97 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 MIR184-201ENST00000384962 84 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 RNA5SP105-201ENST00000391123 113 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 OR1AA1P-201ENST00000419597 916 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 YME1L1P1-201ENST00000429435 297 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 AC005019.1-201ENST00000436455 431 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 TRBV8-2-201ENST00000475637 270 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 APOOP4-201ENST00000513530 597 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 NCAPGP2-201ENST00000557911 754 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 AC015917.1-201ENST00000579654 510 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 MIR4276-201ENST00000584832 70 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 AL034351.1-201ENST00000605288 668 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 OR6R2P-201ENST00000609216 300 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 MIR7975-201ENST00000619350 68 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CISHQ9NSE2 HSPA8P1-201ENST00000425843 1833 ntBASIC3.56□□□□□ -1.84
CISHQ9NSE2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CISHQ9NSE2 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CISHQ9NSE2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CISHQ9NSE2 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 MIR7-3-201ENST00000384898 110 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AL138785.1-201ENST00000425821 331 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 RPL7P28-201ENST00000437739 740 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AL358232.1-201ENST00000448030 501 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 RPL7P31-201ENST00000450192 724 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 AP002371.1-201ENST00000463604 433 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 S100A11P1-201ENST00000477525 312 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 RPL7P38-201ENST00000488396 739 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC011602.1-201ENST00000546484 331 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC011611.1-201ENST00000552179 197 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC092868.3-201ENST00000560515 784 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 RMST_8.1-201ENST00000610287 165 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 AC243654.2-201ENST00000612843 443 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 AP003400.2-201ENST00000624036 666 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
CISHQ9NSE2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
CISHQ9NSE2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CISHQ9NSE2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.55□□□□□ -1.84
CISHQ9NSE2 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CISHQ9NSE2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.54□□□□□ -1.84
CISHQ9NSE2 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CISHQ9NSE2 RNU1-70P-201ENST00000362618 164 ntBASIC3.54□□□□□ -1.84
CISHQ9NSE2 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CISHQ9NSE2 AL138878.1-201ENST00000405131 347 ntBASIC3.54□□□□□ -1.84
CISHQ9NSE2 HMGN1P24-201ENST00000412282 298 ntBASIC3.54□□□□□ -1.84
CISHQ9NSE2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.54□□□□□ -1.84
CISHQ9NSE2 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CISHQ9NSE2 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.54□□□□□ -1.84
CISHQ9NSE2 ATP5C1P1-201ENST00000441945 895 ntBASIC3.54□□□□□ -1.84
CISHQ9NSE2 HMGB3P21-201ENST00000452483 547 ntBASIC3.54□□□□□ -1.84
CISHQ9NSE2 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.54□□□□□ -1.84
CISHQ9NSE2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.54□□□□□ -1.84
CISHQ9NSE2 RPS4XP10-201ENST00000465034 731 ntBASIC3.54□□□□□ -1.84
CISHQ9NSE2 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.54□□□□□ -1.84
CISHQ9NSE2 AC073522.1-201ENST00000483312 377 ntBASIC3.54□□□□□ -1.84
CISHQ9NSE2 AC021678.1-201ENST00000505195 936 ntBASIC3.54□□□□□ -1.84
CISHQ9NSE2 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.54□□□□□ -1.84
CISHQ9NSE2 IGHV3-32-201ENST00000519182 355 ntBASIC3.54□□□□□ -1.84
CISHQ9NSE2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.54□□□□□ -1.84
CISHQ9NSE2 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.54□□□□□ -1.84
CISHQ9NSE2 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms