Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 UBE2NP1-201ENST00000545592 458 ntBASIC3.79□□□□□ -1.8
TRIM4Q9C037 MTND2P13-201ENST00000577438 1039 ntBASIC3.79□□□□□ -1.8
TRIM4Q9C037 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 AC007687.1-201ENST00000602704 304 ntBASIC3.79□□□□□ -1.8
TRIM4Q9C037 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM4Q9C037 AL356274.1-201ENST00000617064 410 ntBASIC3.79□□□□□ -1.8
TRIM4Q9C037 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 OR6C71P-202ENST00000641886 1107 ntBASIC3.79□□□□□ -1.8
TRIM4Q9C037 UBE3AP2-201ENST00000429033 2259 ntBASIC3.79□□□□□ -1.8
TRIM4Q9C037 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM4Q9C037 AL365361.1-201ENST00000566942 3481 ntBASIC3.79□□□□□ -1.8
TRIM4Q9C037 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM4Q9C037 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 AC092079.1-201ENST00000558620 1985 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM4Q9C037 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 AL122016.1-201ENST00000403365 367 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 AC017079.2-201ENST00000416102 485 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 RPL21P109-201ENST00000422213 475 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 AC092832.1-201ENST00000422934 400 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 FCF1P7-201ENST00000451185 558 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 AC006539.3-201ENST00000454258 129 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 TVP23BP2-201ENST00000455082 615 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 AP001486.1-201ENST00000463339 476 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 RPS29P2-201ENST00000479278 136 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 AL049873.1-201ENST00000480540 376 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 IGHV3-76-201ENST00000522465 295 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 AL139174.1-201ENST00000531489 886 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 OR5D17P-201ENST00000531492 978 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM4Q9C037 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 ELOCP35-201ENST00000604289 336 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 U3.45-201ENST00000607547 219 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 AL513477.2-201ENST00000607858 568 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 AC099778.2-201ENST00000610904 211 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 MIR6852-201ENST00000621699 66 ntBASIC3.78□□□□□ -1.8
TRIM4Q9C037 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM4Q9C037 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM4Q9C037 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
TRIM4Q9C037 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM4Q9C037 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 SNORD35B-201ENST00000363660 87 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM4Q9C037 SNORA48.2-201ENST00000390926 124 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 HMGB3P19-201ENST00000403971 560 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 RNU2-65P-201ENST00000410162 185 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 ELOCP10-201ENST00000440624 327 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 RPS4XP4-201ENST00000443195 763 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 MRPL35P4-201ENST00000453682 566 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 BX510359.1-201ENST00000456973 237 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 OR9M1P-201ENST00000459641 921 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 MTND6P6-201ENST00000478031 263 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 RN7SL271P-201ENST00000487601 295 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 RPL29P14-201ENST00000495837 428 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 AC093853.1-201ENST00000515689 483 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM4Q9C037 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 MIR4513-201ENST00000581077 86 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 VN1R84P-201ENST00000593697 235 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 ELOCP34-201ENST00000604436 327 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 BRDTP1-201ENST00000605735 677 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 AL391497.1-201ENST00000608671 547 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 FP236240.3-201ENST00000623061 327 ntBASIC3.77□□□□□ -1.81
TRIM4Q9C037 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM4Q9C037 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM4Q9C037 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM4Q9C037 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms