Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AP005229.2-201ENST00000609980 697 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC024595.1-201ENST00000623088 387 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC090506.2-201ENST00000624521 419 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AP003400.6-201ENST00000624698 740 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC016717.3-201ENST00000624730 554 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AL133412.1-201ENST00000380194 2992 ntBASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HDHD3Q9BSH5 AC010733.2-201ENST00000589496 5702 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 RN7SKP44-201ENST00000363602 316 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 RNU1-32P-201ENST00000363937 159 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 RNU6-283P-201ENST00000364788 107 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 RNU6-207P-201ENST00000384137 107 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 SOD2P1-201ENST00000396543 562 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 RNU2-65P-201ENST00000410162 185 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC092745.2-202ENST00000411880 369 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AL356095.1-201ENST00000417217 199 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC114814.2-201ENST00000419195 485 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC002075.2-201ENST00000425207 252 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 RPS7P5-201ENST00000441482 581 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 CEACAMP9-201ENST00000442990 513 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 TPTE2P6-202ENST00000445572 1007 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 RPS29P31-201ENST00000446147 164 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 NANOGP10-201ENST00000453325 895 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC104689.1-201ENST00000473356 768 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 S100A11P1-201ENST00000477525 312 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 RPS3AP6-201ENST00000484430 795 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC108941.1-201ENST00000502853 530 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC021146.1-201ENST00000511202 716 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC008802.1-201ENST00000519121 791 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 IGHV3-32-201ENST00000519182 355 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC008562.1-201ENST00000521763 330 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 SMARCE1P4-201ENST00000523647 241 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC008489.1-201ENST00000524271 483 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 OR4U1P-201ENST00000554958 912 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC093510.2-201ENST00000562820 896 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 SNORA62.6-201ENST00000606322 83 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AL354760.1-201ENST00000608357 643 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 MIR6500-201ENST00000622700 86 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 OR52H1-202ENST00000641796 1061 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 AL049737.1-201ENST00000413920 1403 ntBASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HDHD3Q9BSH5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HDHD3Q9BSH5 SEC63P2-201ENST00000503863 1939 ntBASIC3.15□□□□□ -1.9
HDHD3Q9BSH5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 RNA5SP97-201ENST00000365006 84 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 SNORD65C-201ENST00000390962 71 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 RHEBP3-201ENST00000411920 351 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC093698.1-201ENST00000423843 571 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AL365396.1-201ENST00000430854 671 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 RPS26P30-201ENST00000443431 335 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 EXTL2P1-201ENST00000446218 416 ntBASIC3.15□□□□□ -1.91
HDHD3Q9BSH5 AL096803.2-201ENST00000450032 677 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms