Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 IQCB2P-201ENST00000401788 1633 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AL442639.1-201ENST00000625030 1899 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AP001486.2-201ENST00000561652 5113 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 RNU1-82P-201ENST00000390851 165 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 RPS4XP9-201ENST00000405151 780 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 MIR1302-8-201ENST00000408342 128 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 MIR1183-201ENST00000408856 89 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AP000357.1-201ENST00000409926 1165 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 RN7SKP106-201ENST00000410832 272 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 RAP1BP1-201ENST00000412709 553 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 MTND4P22-201ENST00000413116 1169 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 LINC01881-201ENST00000416103 412 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AL807761.1-201ENST00000417622 171 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC016907.1-201ENST00000419483 435 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC069213.2-201ENST00000420238 366 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 PTP4A1P5-201ENST00000420305 455 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC073335.1-201ENST00000427776 363 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 ELOCP18-201ENST00000434209 337 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AL359265.2-201ENST00000434367 631 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 RPL7P28-201ENST00000437739 740 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 COX7BP2-201ENST00000437976 242 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 KATNBL1P3-201ENST00000443475 909 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 RSL24D1P3-201ENST00000449255 495 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 RN7SL459P-201ENST00000481078 302 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 MRPS33P3-201ENST00000513456 322 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 RNU6-1129P-201ENST00000515964 104 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 RNU1-6P-201ENST00000516290 144 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 RNA5SP309-201ENST00000516670 106 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 MTCO1P47-201ENST00000523889 1271 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 OR5M2P-201ENST00000529003 936 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 HIGD1AP5-201ENST00000529959 259 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC091178.1-203ENST00000584586 279 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC011477.5-201ENST00000586571 259 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC068790.7-201ENST00000602347 528 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC018638.7-201ENST00000605836 1114 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AL031666.3-201ENST00000609320 1006 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC009090.3-201ENST00000616553 565 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 STMN1P1-201ENST00000617809 440 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 AC024595.1-201ENST00000623088 387 ntBASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TUBA1CQ9BQE3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 RNU1-15P-201ENST00000353977 144 ntBASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 RNU6-413P-201ENST00000384115 107 ntBASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 AL356131.1-201ENST00000405826 414 ntBASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 USP9YP26-201ENST00000421008 661 ntBASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 AC011233.1-201ENST00000422812 283 ntBASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 BX119904.4-201ENST00000424402 301 ntBASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 AL365396.1-201ENST00000430854 671 ntBASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 AC073143.1-201ENST00000436316 395 ntBASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 ELOCP8-201ENST00000439309 332 ntBASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 ELOCP15-201ENST00000442090 332 ntBASIC4.27□□□□□ -1.73
TUBA1CQ9BQE3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 396.2 ms