Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PKP4Q99569 OR1S1-201ENST00000624470 978 ntBASIC4.34□□□□□ -1.71
PKP4Q99569 AC006065.6-201ENST00000625201 545 ntBASIC4.34□□□□□ -1.71
PKP4Q99569 MIR1322-201ENST00000638013 71 ntBASIC4.34□□□□□ -1.71
PKP4Q99569 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.34□□□□□ -1.71
PKP4Q99569 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PKP4Q99569 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PKP4Q99569 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PKP4Q99569 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PKP4Q99569 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PKP4Q99569 XPOTP1-201ENST00000443317 2398 ntBASIC4.34□□□□□ -1.72
PKP4Q99569 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.34□□□□□ -1.72
PKP4Q99569 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
PKP4Q99569 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PKP4Q99569 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
PKP4Q99569 AC010300.1-201ENST00000600671 5134 ntBASIC4.34□□□□□ -1.72
PKP4Q99569 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PKP4Q99569 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.33□□□□□ -1.72
PKP4Q99569 NSRP1P1-201ENST00000444067 1693 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PKP4Q99569 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PKP4Q99569 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PKP4Q99569 AC021755.1-201ENST00000559747 1447 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 MTND4P10-201ENST00000446199 1363 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 RNA5SP443-201ENST00000363083 132 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 RNA5SP391-201ENST00000363456 119 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 RNA5SP27-201ENST00000363839 119 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 MIR129-1-201ENST00000384972 72 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 SNORD65C-201ENST00000390962 71 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 RPL23AP59-201ENST00000399415 461 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 RPL26P29-201ENST00000415623 438 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP4Q99569 CENPIP1-201ENST00000425713 902 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP4Q99569 AC008065.1-201ENST00000428525 348 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP4Q99569 UBE2V1P3-201ENST00000439651 417 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP4Q99569 AL592437.1-201ENST00000443781 492 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 MTCYBP42-201ENST00000444653 1130 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP4Q99569 AL645939.1-201ENST00000453429 797 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.33□□□□□ -1.72
PKP4Q99569 RPS20P21-201ENST00000466859 343 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 RPL23AP65-201ENST00000475608 468 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 RPL23AP44-201ENST00000482216 473 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC090013.1-201ENST00000485147 480 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AK3P4-201ENST00000504283 583 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.33□□□□□ -1.72
PKP4Q99569 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP4Q99569 AC090071.1-201ENST00000507713 644 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC021146.3-201ENST00000511911 260 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC119751.1-201ENST00000513357 765 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP4Q99569 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP4Q99569 MTND2P26-201ENST00000528255 1029 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PKP4Q99569 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.33□□□□□ -1.72
PKP4Q99569 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP4Q99569 RN7SL52P-201ENST00000584271 284 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 DPRXP5-201ENST00000604662 539 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AL160290.3-201ENST00000604869 165 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC010201.1-201ENST00000605051 540 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 VIS1.1-201ENST00000610517 203 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC024257.5-201ENST00000612739 531 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AC090116.1-201ENST00000615679 446 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 RN7SL722P-201ENST00000617780 284 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PKP4Q99569 RN7SL565P-201ENST00000618246 284 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AP000346.3-201ENST00000622821 210 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.33□□□□□ -1.72
PKP4Q99569 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.33□□□□□ -1.72
PKP4Q99569 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP4Q99569 LINC02211-204ENST00000642024 1070 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
PKP4Q99569 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.33□□□□□ -1.72
PKP4Q99569 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PKP4Q99569 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.33□□□□□ -1.72
PKP4Q99569 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
PKP4Q99569 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PKP4Q99569 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PKP4Q99569 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PKP4Q99569 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PKP4Q99569 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.33□□□□□ -1.72
PKP4Q99569 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PKP4Q99569 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PKP4Q99569 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP4Q99569 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PKP4Q99569 AC104446.1-201ENST00000613728 1321 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
PKP4Q99569 IL6STP1-201ENST00000346911 1020 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 RNU1-20P-201ENST00000363314 162 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 RNU1-130P-201ENST00000363930 160 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 RNU5A-2P-201ENST00000384337 116 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.32□□□□□ -1.72
PKP4Q99569 AL121834.1-202ENST00000404494 277 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 RPL23AP48-201ENST00000406913 488 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 TMSB10P2-201ENST00000416049 131 ntBASIC4.32□□□□□ -1.72
PKP4Q99569 RPL31P45-201ENST00000419532 356 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms