Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 SNORD115-48-201ENST00000364764 76 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 MIR554-201ENST00000384874 96 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 MIR134-201ENST00000385258 73 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 SNORA57.3-201ENST00000411095 141 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 RHEBP3-201ENST00000411920 351 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 RPS20P25-201ENST00000412447 352 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AC234782.4-201ENST00000417646 1048 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AC092647.1-201ENST00000420654 287 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 CR848007.2-201ENST00000424918 787 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 MTND5P8-201ENST00000449817 1083 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 RNU7-170P-201ENST00000459303 61 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 RPL21P103-201ENST00000479921 488 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 HMGB3P14-201ENST00000494195 599 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AC111193.1-201ENST00000504097 155 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 RNA5SP164-201ENST00000516533 110 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 SCARNA14-201ENST00000516903 136 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 IGKV2-23-201ENST00000518729 323 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 POLR2KP1-201ENST00000553226 168 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AL034351.1-201ENST00000605288 668 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 AC020658.4-201ENST00000613987 684 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 ATE1-AS1-202ENST00000636460 506 ntBASIC3.94□□□□□ -1.78
RPRD1AQ96P16 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPRD1AQ96P16 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 RNU2-6P-201ENST00000411404 190 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AL591419.1-201ENST00000427423 339 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 RPL7P29-201ENST00000437151 728 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 CDC27P1-201ENST00000445384 715 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 RPL37P3-201ENST00000456825 293 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 RPS20P21-201ENST00000466859 343 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AC007537.2-201ENST00000472093 511 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 RPL7P47-201ENST00000497299 556 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 RNU1-45P-201ENST00000517191 141 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AC011374.2-201ENST00000607135 526 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AC105429.2-201ENST00000610567 517 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AL356863.1-201ENST00000623378 1080 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AC020978.9-201ENST00000624380 1141 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 DCAF13P1-201ENST00000495256 1330 ntBASIC3.93□□□□□ -1.78
RPRD1AQ96P16 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPRD1AQ96P16 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
RPRD1AQ96P16 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RPRD1AQ96P16 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RPRD1AQ96P16 AL353746.1-201ENST00000566293 6881 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RPRD1AQ96P16 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RPRD1AQ96P16 MIR142-201ENST00000384835 87 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RPRD1AQ96P16 AL353692.2-201ENST00000407054 335 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 XKRYP4-201ENST00000414395 483 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.92□□□□□ -1.78
RPRD1AQ96P16 AL445584.1-201ENST00000431451 330 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 MTCYBP21-201ENST00000443300 1113 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 AC097499.1-201ENST00000444277 208 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 XKRYP5-201ENST00000449659 483 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 AL513343.1-201ENST00000451818 792 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 TVP23BP2-201ENST00000455082 615 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 AL136097.1-201ENST00000456945 913 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 RPL7L1P8-201ENST00000469911 741 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
RPRD1AQ96P16 AC108941.1-201ENST00000502853 530 ntBASIC3.92□□□□□ -1.78
RPRD1AQ96P16 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.92□□□□□ -1.78
RPRD1AQ96P16 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms