Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.54□□□□□ -1.52
ERCC4Q92889 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.54□□□□□ -1.52
ERCC4Q92889 CKS1BP6-201ENST00000424932 240 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.54□□□□□ -1.52
ERCC4Q92889 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.54□□□□□ -1.52
ERCC4Q92889 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.54□□□□□ -1.52
ERCC4Q92889 AL512286.1-201ENST00000439244 400 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.54□□□□□ -1.52
ERCC4Q92889 EPS15P1-201ENST00000448836 336 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.54□□□□□ -1.52
ERCC4Q92889 BX284632.1-201ENST00000478218 541 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 RPL9P33-201ENST00000484311 566 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 RPS21P4-201ENST00000487122 248 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 SNX5P1-201ENST00000505757 1041 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AC008638.1-201ENST00000506035 866 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AC090071.1-201ENST00000507713 644 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC5.54□□□□□ -1.52
ERCC4Q92889 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
ERCC4Q92889 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.54□□□□□ -1.52
ERCC4Q92889 RNU6-1261P-201ENST00000517194 104 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AC008802.1-201ENST00000519121 791 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AC008562.1-201ENST00000521763 330 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 HIGD1AP6-201ENST00000521833 279 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ERCC4Q92889 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.54□□□□□ -1.52
ERCC4Q92889 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.54□□□□□ -1.52
ERCC4Q92889 AC138915.2-201ENST00000569776 97 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 OR7E18P-201ENST00000592589 702 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 uc_338.9-201ENST00000617424 182 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AC243756.2-201ENST00000618406 463 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AC018816.2-201ENST00000621460 353 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AC012414.7-202ENST00000622705 1090 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AL356266.1-201ENST00000623311 483 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AC025048.6-202ENST00000627667 438 ntBASIC5.54□□□□□ -1.52
ERCC4Q92889 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.54□□□□□ -1.52
ERCC4Q92889 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
ERCC4Q92889 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ERCC4Q92889 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.54□□□□□ -1.52
ERCC4Q92889 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.54□□□□□ -1.52
ERCC4Q92889 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ERCC4Q92889 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
ERCC4Q92889 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.53□□□□□ -1.52
ERCC4Q92889 CDR1-202ENST00000625883 1485 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 MAPK10-286ENST00000641208 8747 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AL512646.1-201ENST00000269395 1077 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 SNORA17.1-201ENST00000362945 126 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 RNU6-374P-201ENST00000364146 108 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.53□□□□□ -1.52
ERCC4Q92889 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.53□□□□□ -1.52
ERCC4Q92889 RPL21P108-201ENST00000413857 481 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 MTCYBP38-201ENST00000417160 1123 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AC073136.2-201ENST00000417282 849 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC5.53□□□□□ -1.52
ERCC4Q92889 EIF4HP2-201ENST00000424380 563 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AC010975.2-201ENST00000427781 588 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 MTCO3P21-201ENST00000430791 643 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ERCC4Q92889 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
ERCC4Q92889 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.53□□□□□ -1.52
ERCC4Q92889 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.53□□□□□ -1.52
ERCC4Q92889 AC090013.1-201ENST00000485147 480 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.53□□□□□ -1.52
ERCC4Q92889 RNY4P37-201ENST00000516225 96 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 RNA5SP43-201ENST00000516559 110 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 IGHV3-32-201ENST00000519182 355 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 COX6B1P6-201ENST00000522347 255 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.53□□□□□ -1.52
ERCC4Q92889 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.53□□□□□ -1.52
ERCC4Q92889 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.53□□□□□ -1.52
ERCC4Q92889 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ERCC4Q92889 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ERCC4Q92889 AC087481.2-201ENST00000565492 330 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 MTND1P15-201ENST00000579262 949 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AP005119.2-201ENST00000579735 1105 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
ERCC4Q92889 AC087283.1-201ENST00000604029 1074 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AC069304.2-201ENST00000605154 435 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AC108747.1-201ENST00000609508 535 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AC126915.2-201ENST00000610957 190 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 SDR42E1P1-201ENST00000611327 477 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AL355073.2-201ENST00000612106 557 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.53□□□□□ -1.52
ERCC4Q92889 U6atac.1-201ENST00000616025 117 ntBASIC5.53□□□□□ -1.52
ERCC4Q92889 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.53□□□□□ -1.52
ERCC4Q92889 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ERCC4Q92889 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.53□□□□□ -1.52
ERCC4Q92889 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ERCC4Q92889 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 FGF7P2-201ENST00000332473 296 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 RNA5SP455-201ENST00000365190 119 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ERCC4Q92889 RNU6-171P-201ENST00000384354 107 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 MIR223-201ENST00000385204 110 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms