Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL354760.1-201ENST00000608357 643 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AL391497.1-201ENST00000608671 547 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AP002799.1-201ENST00000623552 423 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC026634.1-201ENST00000634369 198 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 HSPA8P18-201ENST00000439846 1928 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 EOGT-210ENST00000615922 1931 ntBASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
ATG4AQ8WYN0 AL356473.1-201ENST00000406203 1408 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 LINC01355-201ENST00000566551 5444 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 Y_RNA.302-201ENST00000364997 102 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 RSU1P3-201ENST00000412878 835 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AL591848.1-201ENST00000413092 322 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC004022.2-201ENST00000413824 193 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 FCF1P2-201ENST00000415284 583 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC092634.6-201ENST00000418558 192 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC062016.2-201ENST00000420950 676 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 FTLP19-201ENST00000433300 394 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC004865.1-201ENST00000442276 1003 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC108463.1-201ENST00000450258 347 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 RPL36AP33-201ENST00000450395 310 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 RPS5P7-201ENST00000456664 608 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 NF1P3-201ENST00000457709 450 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC116337.2-201ENST00000477662 156 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 RN7SL817P-201ENST00000480777 288 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 RN7SL808P-201ENST00000496066 299 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 SCARNA22-201ENST00000503991 125 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC004069.2-201ENST00000505438 1114 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 CBX3P3-201ENST00000508108 532 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC027309.2-201ENST00000520566 192 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC021006.3-201ENST00000530771 192 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 SLC2A13P1-201ENST00000531560 322 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 RPL21P7-201ENST00000557463 483 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC074051.3-201ENST00000570238 358 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC090181.2-201ENST00000602975 672 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC092354.2-201ENST00000607786 514 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC024560.3-201ENST00000608482 349 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC106028.5-201ENST00000610332 395 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC243654.2-201ENST00000612843 443 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC092192.1-201ENST00000633154 1018 ntBASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
ATG4AQ8WYN0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AL391684.1-202ENST00000641293 1636 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 INTS6P1-201ENST00000504674 2530 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 RNA5SP305-201ENST00000362665 119 ntBASIC4.79□□□□□ -1.64
ATG4AQ8WYN0 RNU6-115P-201ENST00000364310 107 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms