Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC027281.1-201ENST00000574178 758 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC005726.4-201ENST00000582858 458 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AL354984.3-201ENST00000604803 325 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 RNA5SP440-201ENST00000612665 119 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC004696.1-201ENST00000614345 607 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AL110115.1-201ENST00000614396 364 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AP003072.5-201ENST00000623872 773 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 IPO5-229ENST00000631030 192 ntTSL 5 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 ELL2P4-201ENST00000446870 1376 ntBASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPTSSBQ8NFR3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC092447.7-201ENST00000422212 1621 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 MIR331-201ENST00000362302 94 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 VTRNA1-1-201ENST00000363120 99 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 RNA5SP391-201ENST00000363456 119 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL645927.1-201ENST00000396783 406 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL357075.1-201ENST00000404107 726 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 RN7SKP235-201ENST00000410662 305 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 ZNF736P2Y-201ENST00000416040 1279 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 UQCRBP1-201ENST00000421129 336 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL358472.1-201ENST00000431295 329 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 RPS4XP4-201ENST00000443195 763 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC010655.1-201ENST00000449336 292 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 Z99714.1-201ENST00000450463 807 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 RNA5SP246-201ENST00000458909 119 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC010618.1-201ENST00000469924 477 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 RPL37AP8-201ENST00000494116 276 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC111000.2-201ENST00000507775 550 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC010285.3-201ENST00000511668 676 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 RNA5SP96-201ENST00000516041 107 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 SNORA70.19-201ENST00000516717 90 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC107934.2-201ENST00000518653 310 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC104027.1-201ENST00000521887 300 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AP001781.1-201ENST00000530977 207 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 TVP23BP1-201ENST00000557500 617 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC012146.2-201ENST00000576545 416 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC006116.7-201ENST00000590141 756 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL031985.2-201ENST00000600955 480 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC114878.2-201ENST00000604863 1251 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC019159.1-201ENST00000605094 187 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC126175.1-201ENST00000617041 758 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AP003122.6-201ENST00000623831 495 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 AC119674.1-207ENST00000641355 633 ntBASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPTSSBQ8NFR3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.91□□□□□ -2.1
SPTSSBQ8NFR3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SPTSSBQ8NFR3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.91□□□□□ -2.1
SPTSSBQ8NFR3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SPTSSBQ8NFR3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SPTSSBQ8NFR3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SPTSSBQ8NFR3 AC022306.1-201ENST00000560489 1562 ntBASIC1.91□□□□□ -2.1
SPTSSBQ8NFR3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SPTSSBQ8NFR3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SPTSSBQ8NFR3 RNU6-666P-201ENST00000363499 107 ntBASIC1.91□□□□□ -2.1
SPTSSBQ8NFR3 RN7SKP257-201ENST00000364525 309 ntBASIC1.91□□□□□ -2.1
SPTSSBQ8NFR3 CD24P4-201ENST00000382840 243 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms