Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC005294.1-201ENST00000355509 281 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 RNU6-984P-201ENST00000363236 109 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 SNORA16A-201ENST00000384342 137 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 SNORA67-201ENST00000384423 137 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 PRELID3BP11-201ENST00000414230 479 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 SDCBPP2-201ENST00000424643 885 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC023347.2-201ENST00000433994 462 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 SKP1P1-201ENST00000438081 489 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 USP9YP8-201ENST00000441913 500 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 MED28P3-201ENST00000444288 531 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 MTCO1P48-201ENST00000448024 1096 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AMD1P1-201ENST00000457220 922 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 RNU7-136P-201ENST00000458819 69 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 RN7SL172P-201ENST00000460535 303 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 MTND1P3-201ENST00000484956 952 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 UBA52P7-201ENST00000486088 380 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC005912.1-201ENST00000495392 255 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 KLRA1P-201ENST00000503499 986 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC024558.1-201ENST00000505008 528 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 GLUD1P3-202ENST00000508551 200 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC105914.1-201ENST00000511798 226 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AP001893.2-201ENST00000526949 202 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 OR5AP1P-201ENST00000529730 940 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC104383.1-201ENST00000530297 370 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 OR10G5P-201ENST00000532733 358 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 FGF7P1-201ENST00000582820 288 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AL139286.1-201ENST00000604465 483 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AL049634.3-201ENST00000604968 457 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 BCRP9-201ENST00000605312 388 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC018695.5-201ENST00000605872 315 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AP003117.2-201ENST00000606010 545 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AL022394.1-201ENST00000606979 292 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 AC099654.5-201ENST00000636479 350 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 PABPC1P6-201ENST00000445594 1829 ntBASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM48Q8IWZ4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 C4BPAP1-201ENST00000415474 1893 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 U8.3-201ENST00000363321 132 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 Y_RNA.813-201ENST00000364639 102 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 RNU6-171P-201ENST00000384354 107 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 RNA5SP339-201ENST00000390987 122 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 RNA5SP487-201ENST00000410186 122 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 RNU4-34P-201ENST00000410431 124 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 SPA17P1-201ENST00000416656 452 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 RPL37P1-201ENST00000432310 284 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 FCF1P1-201ENST00000432690 571 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 NPM1P18-201ENST00000434232 732 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC009961.2-201ENST00000435771 251 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 SNRPEP7-201ENST00000438350 220 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 LINC02210-201ENST00000444561 288 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC099563.1-201ENST00000456086 418 ntBASIC5.28□□□□□ -1.56
TRIM48Q8IWZ4 AC092754.1-201ENST00000472975 479 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms