Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MTCO1P35-201ENST00000515270 228 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 SNORA31.13-201ENST00000516624 135 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 MIR4738-201ENST00000579134 87 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 AC005255.1-201ENST00000593748 216 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 AC007423.1-201ENST00000605009 627 ntBASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC50Q8IVM0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 RAD1P1-201ENST00000231383 813 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 SNORA62-201ENST00000365493 153 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 RNU6-98P-201ENST00000384173 107 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 RNU6-883P-201ENST00000384597 107 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 MIR142-201ENST00000384835 87 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AL356057.1-202ENST00000402263 756 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 RPS24P8-201ENST00000431490 402 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 ELOCP11-201ENST00000436690 332 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 ELOCP16-201ENST00000444494 332 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC114755.5-201ENST00000447760 831 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 TPMTP4-201ENST00000450749 678 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 MTND2P6-201ENST00000455337 1030 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC010683.1-201ENST00000473673 378 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 PCBP2P3-201ENST00000509726 843 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 PHBP14-201ENST00000512887 367 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 RNA5SP164-201ENST00000516533 110 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 MTND4LP24-201ENST00000572277 291 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AL606490.9-201ENST00000603331 271 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC069304.3-201ENST00000603938 1084 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC092653.1-201ENST00000608509 531 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 AC079684.1-201ENST00000621405 437 ntBASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC50Q8IVM0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 SNORD6-201ENST00000365444 73 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 RNU4-31P-201ENST00000384211 141 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 XKRYP4-201ENST00000414395 483 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AC114814.2-201ENST00000419195 485 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AL117339.2-201ENST00000430475 180 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AL035458.1-201ENST00000433096 585 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AL353093.1-201ENST00000441292 436 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 MTCYBP21-201ENST00000443300 1113 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 XKRYP5-201ENST00000449659 483 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AC018635.1-201ENST00000468292 1030 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AP002884.2-201ENST00000471647 395 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AC023050.1-201ENST00000498198 304 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 FTH1P21-201ENST00000512179 511 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 RNA5SP309-201ENST00000516670 106 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 RNU6-352P-201ENST00000516908 107 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 IGKV2-36-201ENST00000519999 223 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AL163642.2-201ENST00000604722 1019 ntBASIC3.92□□□□□ -1.78
CCDC50Q8IVM0 AL590392.1-201ENST00000604960 446 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms