Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC022034.3-201ENST00000471393 478 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 RPS4XP13-201ENST00000483219 789 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 RPL23AP72-201ENST00000492447 435 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC098799.1-201ENST00000504752 800 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 HMGB3P15-201ENST00000507326 574 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 MTCYBP37-201ENST00000510642 1133 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 HMGN1P15-201ENST00000513870 295 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 RNA5SP92-201ENST00000516437 110 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 CYP2C60P-201ENST00000566088 139 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 MIR3691-201ENST00000578066 90 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 MIR4644-201ENST00000579929 84 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC103881.1-201ENST00000603476 538 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC006023.2-201ENST00000609916 167 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC007497.1-201ENST00000610421 561 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC005156.1-201ENST00000613371 573 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AP000943.4-201ENST00000622912 357 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AL355480.1-201ENST00000629041 99 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 HSPA8P1-201ENST00000425843 1833 ntBASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KCNIP4Q6PIL6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
KCNIP4Q6PIL6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.34□□□□□ -1.88
KCNIP4Q6PIL6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
KCNIP4Q6PIL6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AL442639.1-201ENST00000625030 1899 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 RNU6-839P-201ENST00000363347 108 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 MT-TC-201ENST00000387405 66 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AP000567.1-201ENST00000406413 156 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 FNDC3CP-201ENST00000420795 1155 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC017083.1-201ENST00000428093 483 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC096638.2-201ENST00000434965 711 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 CEACAMP9-201ENST00000442990 513 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC112498.1-201ENST00000444401 332 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 MTCO3P20-201ENST00000454926 688 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC078785.3-201ENST00000476607 425 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC091868.1-201ENST00000508746 304 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC092451.2-201ENST00000538746 658 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 MIR4489-201ENST00000578869 62 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 SNORD39.3-201ENST00000584451 71 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AL391358.1-201ENST00000605342 190 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AL513477.2-201ENST00000607858 568 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC090116.1-201ENST00000615679 446 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 RPS4XP5-202ENST00000449995 1334 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 C4BPAP1-201ENST00000415474 1893 ntBASIC3.33□□□□□ -1.88
KCNIP4Q6PIL6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KCNIP4Q6PIL6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
KCNIP4Q6PIL6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
KCNIP4Q6PIL6 AC093010.3-201ENST00000570269 15214 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms