Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 MTCO1P8-201ENST00000416914 1523 ntBASIC3.2□□□□□ -1.9
RIF1Q5UIP0 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RIF1Q5UIP0 AL672296.1-201ENST00000427780 2158 ntBASIC3.2□□□□□ -1.9
RIF1Q5UIP0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 AC090602.1-201ENST00000469695 252 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 ATP5F1P7-201ENST00000567330 760 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 AC138761.3-201ENST00000579993 334 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 UBL5P2-201ENST00000583788 219 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 AC000403.1-201ENST00000613696 3585 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 RNA5SP229-201ENST00000410809 99 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 VTI1BP4-201ENST00000427516 527 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 AC007563.3-201ENST00000433233 371 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 TRBV12-2-201ENST00000489763 344 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 COX6CP8-201ENST00000522620 226 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 AL096803.3-201ENST00000609032 532 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 AC083843.2-201ENST00000568248 6253 ntBASIC3.19□□□□□ -1.9
RIF1Q5UIP0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.19□□□□□ -1.9
RIF1Q5UIP0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 VN1R8P-201ENST00000407739 893 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 MTND4P22-201ENST00000413116 1169 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 AC019097.1-201ENST00000424783 735 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 AC132942.1-201ENST00000486753 483 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 SUMO2P20-201ENST00000520803 283 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 OR4R3P-201ENST00000525084 838 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 OR4C2P-201ENST00000530855 1064 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 AP000873.5-201ENST00000533906 236 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 AL158827.2-201ENST00000602494 330 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 AL691447.3-201ENST00000635020 330 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RIF1Q5UIP0 AP000542.2-201ENST00000623199 6179 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RIF1Q5UIP0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RIF1Q5UIP0 IPO8P1-201ENST00000455509 3109 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RIF1Q5UIP0 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.18□□□□□ -1.9
RIF1Q5UIP0 RPS4XP13-201ENST00000483219 789 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.18□□□□□ -1.9
RIF1Q5UIP0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC3.18□□□□□ -1.9
RIF1Q5UIP0 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.18□□□□□ -1.9
RIF1Q5UIP0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.18□□□□□ -1.9
RIF1Q5UIP0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RIF1Q5UIP0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RIF1Q5UIP0 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.18□□□□□ -1.9
RIF1Q5UIP0 MIR1271-201ENST00000408537 86 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 RPL36AP10-201ENST00000421785 322 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 RPL21P40-201ENST00000428586 483 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 RPS29P26-201ENST00000477483 171 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AC025181.1-201ENST00000477507 416 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AC008837.1-201ENST00000511513 412 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AP002770.2-201ENST00000543613 532 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AC063923.1-201ENST00000478982 1619 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 NPM1P25-201ENST00000429734 854 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AL139132.1-201ENST00000431587 344 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AC114967.1-201ENST00000504890 259 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 RNU6-991P-201ENST00000516168 107 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 KLKP1-201ENST00000595979 403 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AC025754.2-201ENST00000606491 432 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AL162574.2-201ENST00000614618 657 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AC046144.1-201ENST00000478559 1853 ntBASIC3.17□□□□□ -1.9
RIF1Q5UIP0 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC3.17□□□□□ -1.9
RIF1Q5UIP0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
RIF1Q5UIP0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms