Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRK2Q5S007 AC068020.1-201ENST00000594215 661 ntBASIC2.89□□□□□ -1.95
LRRK2Q5S007 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.89□□□□□ -1.95
LRRK2Q5S007 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRK2Q5S007 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRK2Q5S007 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
LRRK2Q5S007 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRK2Q5S007 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRK2Q5S007 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRK2Q5S007 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 MIR1287-201ENST00000408492 90 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 AC117434.1-201ENST00000419971 836 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 TRAV15-201ENST00000556680 249 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 BNIP3P8-201ENST00000597863 560 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 AL162574.2-201ENST00000614618 657 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LRRK2Q5S007 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LRRK2Q5S007 Y_RNA.269-201ENST00000364685 89 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LRRK2Q5S007 SNORA67.4-201ENST00000384688 142 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 snoU13.23-201ENST00000458863 104 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 RPS4XP13-201ENST00000483219 789 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 AC093815.1-201ENST00000508637 280 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LRRK2Q5S007 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 VN1R90P-201ENST00000595717 726 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 AC103710.3-201ENST00000608157 948 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 AL592295.2-201ENST00000612578 206 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 AC015871.5-202ENST00000623252 701 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 DDX6P1-205ENST00000441966 1436 ntBASIC2.88□□□□□ -1.95
LRRK2Q5S007 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRK2Q5S007 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LRRK2Q5S007 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LRRK2Q5S007 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LRRK2Q5S007 AC083837.1-201ENST00000565297 2994 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LRRK2Q5S007 OR13C3-201ENST00000374781 1108 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 RN7SKP220-201ENST00000410611 288 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 SNRPCP3-201ENST00000474888 476 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 DEFB109A-201ENST00000482450 265 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 TRBV12-2-201ENST00000489763 344 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 AL035404.1-201ENST00000497982 568 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 AC114781.4-201ENST00000513707 639 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 AC009812.2-201ENST00000517657 457 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 CYP4A43P-201ENST00000568156 121 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRK2Q5S007 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.87□□□□□ -1.95
LRRK2Q5S007 AL590808.1-201ENST00000618696 141 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LRRK2Q5S007 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LRRK2Q5S007 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LRRK2Q5S007 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
LRRK2Q5S007 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LRRK2Q5S007 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.87□□□□□ -1.95
LRRK2Q5S007 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.87□□□□□ -1.95
LRRK2Q5S007 RNU1-15P-201ENST00000353977 144 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 MIR184-201ENST00000384962 84 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 SEPT7P8-201ENST00000413308 775 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 SMC4P1-201ENST00000414479 527 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 EEF1A1P41-201ENST00000414667 207 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 HMGN2P27-201ENST00000427352 270 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 AC096638.2-201ENST00000434965 711 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.87□□□□□ -1.95
LRRK2Q5S007 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC2.87□□□□□ -1.95
LRRK2Q5S007 AC021146.3-201ENST00000511911 260 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 RNU4-29P-201ENST00000515943 174 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LRRK2Q5S007 AC100770.1-201ENST00000532310 322 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.87□□□□□ -1.95
LRRK2Q5S007 AC124856.1-201ENST00000600819 896 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 AP000255.1-201ENST00000610276 676 ntBASIC2.87□□□□□ -1.95
LRRK2Q5S007 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.87□□□□□ -1.95
LRRK2Q5S007 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LRRK2Q5S007 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LRRK2Q5S007 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.87□□□□□ -1.95
LRRK2Q5S007 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
LRRK2Q5S007 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LRRK2Q5S007 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.86□□□□□ -1.95
LRRK2Q5S007 SNORA9.2-201ENST00000365361 133 ntBASIC2.86□□□□□ -1.95
LRRK2Q5S007 SNORA18.3-201ENST00000384122 132 ntBASIC2.86□□□□□ -1.95
LRRK2Q5S007 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LRRK2Q5S007 RPL6P21-201ENST00000418672 846 ntBASIC2.86□□□□□ -1.95
LRRK2Q5S007 MAPRE1P3-201ENST00000435438 796 ntBASIC2.86□□□□□ -1.95
LRRK2Q5S007 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LRRK2Q5S007 H3F3AP1-201ENST00000559984 334 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms