Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPL12P26-201ENST00000452430 487 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 ANKRD26P4-201ENST00000455755 950 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 MTND1P16-201ENST00000465177 898 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 RPL7AP6-201ENST00000477943 801 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 NDUFA5P12-201ENST00000503796 343 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 MTCYBP37-201ENST00000510642 1133 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 OR4A45P-201ENST00000529954 901 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 PDCL2P2-201ENST00000533651 189 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC125611.1-201ENST00000549563 229 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC009712.1-201ENST00000564938 316 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 AL121834.1-201ENST00000572284 509 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC209154.1-201ENST00000582156 337 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC008638.3-201ENST00000603341 463 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC116651.1-201ENST00000609724 556 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC004948.1-201ENST00000609858 672 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC007497.1-201ENST00000610421 561 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 AP000484.1-201ENST00000620067 1252 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC116618.1-201ENST00000634617 774 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC38Q502W7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
CCDC38Q502W7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC38Q502W7 AC009951.1-201ENST00000623674 2614 ntBASIC4.84□□□□□ -1.63
CCDC38Q502W7 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.84□□□□□ -1.64
CCDC38Q502W7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC38Q502W7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC38Q502W7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC38Q502W7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC073429.2-201ENST00000569694 1444 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC38Q502W7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC38Q502W7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC38Q502W7 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC38Q502W7 RNU6-1214P-201ENST00000363650 109 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 RNU6-657P-201ENST00000383904 107 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 RNU6-157P-201ENST00000383957 107 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 SNORA70E-201ENST00000384492 135 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC38Q502W7 MIR921-201ENST00000401133 56 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 OR2B7P-201ENST00000429302 934 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 MTND1P32-201ENST00000433043 938 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 PSMD10P3-201ENST00000437000 448 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 AL353748.1-201ENST00000440753 474 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 MTCYBP11-201ENST00000447254 1109 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 RPL23AP65-201ENST00000475608 468 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 RPL7P18-201ENST00000478965 734 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 HMGB1P28-201ENST00000507778 552 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC010587.2-201ENST00000511727 448 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 SNORA3.4-201ENST00000515969 96 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 SLC2A13P1-201ENST00000531560 322 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 DUXAP1-201ENST00000556632 463 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 OR1F2P-201ENST00000570470 933 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 SLC25A36P1-201ENST00000590111 465 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC38Q502W7 YWHAQP7-201ENST00000603536 658 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC069304.2-201ENST00000605154 435 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AP001521.2-201ENST00000608772 546 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC231759.1-201ENST00000616455 597 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC099669.2-201ENST00000616549 437 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 AC090510.2-201ENST00000617465 629 ntBASIC4.83□□□□□ -1.64
CCDC38Q502W7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC38Q502W7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC38Q502W7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC38Q502W7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC38Q502W7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC38Q502W7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC38Q502W7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms