Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MIR3200-201ENST00000580767 85 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AC005412.1-201ENST00000580812 1049 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AP001180.3-201ENST00000582221 145 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AC005242.1-201ENST00000585658 438 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 RNA5SP108-201ENST00000605921 117 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AL450270.1-201ENST00000606160 391 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 AC015967.1-201ENST00000619893 476 ntBASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
SHROOM1Q2M3G4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 RNVU1-14-201ENST00000384770 164 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 UBE2V1P15-201ENST00000407776 448 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 PRELID3BP11-201ENST00000414230 479 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 MTND4P11-201ENST00000417020 1058 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 RPS12P23-201ENST00000419579 400 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AC092832.1-201ENST00000422934 400 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 MTND4P24-201ENST00000424002 397 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AP000907.1-201ENST00000428428 510 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 OR4C2P-201ENST00000530855 1064 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AC135001.1-201ENST00000544546 283 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AC008011.1-201ENST00000545989 227 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AL139395.1-201ENST00000603662 160 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AL139286.1-201ENST00000604465 483 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AC105429.2-201ENST00000610567 517 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 AC019176.2-201ENST00000611579 315 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 uc_338.32-201ENST00000615087 172 ntBASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SHROOM1Q2M3G4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHROOM1Q2M3G4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHROOM1Q2M3G4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 SNORD115-48-201ENST00000364764 76 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 SNORA9-201ENST00000384215 133 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 MIR513A2-201ENST00000385249 127 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AL357078.2-201ENST00000416486 427 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 DBIP2-201ENST00000419076 262 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AL159987.2-201ENST00000432754 307 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC023347.2-201ENST00000433994 462 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 RPL7P15-201ENST00000461190 712 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 RPL7P48-201ENST00000461513 746 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC087385.1-201ENST00000475062 312 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC108729.2-201ENST00000476543 840 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC084198.1-201ENST00000477747 402 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC005726.1-201ENST00000494679 427 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 STMN1P2-201ENST00000508435 439 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC023141.12-201ENST00000512399 199 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 MYL12AP1-201ENST00000518490 515 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 HAUS1P3-201ENST00000523909 662 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC004923.2-201ENST00000529649 369 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC006960.3-201ENST00000561845 705 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 LLPHP1-201ENST00000603571 367 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC242628.1-201ENST00000606810 391 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC091953.5-201ENST00000622919 233 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AC020923.1-201ENST00000624021 917 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 AL161912.2-201ENST00000565707 3007 ntBASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.4□□□□□ -1.71
SHROOM1Q2M3G4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHROOM1Q2M3G4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms