Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FTX_2.1-201ENST00000618816 94 ntBASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 MIR8062-201ENST00000621515 85 ntBASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 AC120057.5-201ENST00000623840 154 ntBASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 AC025470.1-201ENST00000510053 2032 ntBASIC5.86□□□□□ -1.47
RSPO4Q2I0M5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AL589993.1-201ENST00000407450 2524 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC112255.1-201ENST00000624070 2493 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 U8.4-201ENST00000363626 134 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 RNU1-24P-201ENST00000364285 165 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 Y_RNA.373-201ENST00000365600 103 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 RNU6-432P-201ENST00000384196 109 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 RNU6-662P-201ENST00000384253 104 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 Y_RNA.645-201ENST00000391229 102 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC104651.2-201ENST00000447549 528 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AL590664.1-201ENST00000448065 339 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 SLC31A1P1-201ENST00000451221 567 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC013470.1-201ENST00000453438 462 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC091965.3-201ENST00000506236 208 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC025465.3-201ENST00000510570 311 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 RNU6-1023P-201ENST00000516137 106 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 OR4P1P-201ENST00000530808 1136 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 IMMP1LP2-201ENST00000552954 492 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 MIR3133-201ENST00000583157 78 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AF038458.1-201ENST00000588406 262 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 RNF138P2-201ENST00000603490 592 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC018926.3-201ENST00000618841 406 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 RPL23AP61-201ENST00000623642 466 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AL512643.1-201ENST00000635735 524 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC009120.2-204ENST00000621548 2032 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 AC073342.2-201ENST00000595842 1800 ntBASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RSPO4Q2I0M5 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC016583.1-201ENST00000624221 2431 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 SNORA20.1-201ENST00000364790 130 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 RNU6-996P-201ENST00000365438 107 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 RNU6-108P-201ENST00000365558 107 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 RNU6-472P-201ENST00000384299 107 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 SNORD37.1-201ENST00000390968 65 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC016739.1-201ENST00000405359 345 ntBASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.84□□□□□ -1.47
RSPO4Q2I0M5 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms