Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.34□□□□□ -1.71
GABPAQ06546 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
GABPAQ06546 AC123786.2-201ENST00000603459 275 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 AC079880.2-201ENST00000603790 1213 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 AC015813.4-201ENST00000610469 179 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 LINC00901.1-201ENST00000617252 152 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 AC139769.3-201ENST00000618383 175 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 AC097460.3-201ENST00000623099 442 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 AC015908.5-201ENST00000623289 343 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.34□□□□□ -1.71
GABPAQ06546 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GABPAQ06546 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GABPAQ06546 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GABPAQ06546 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.34□□□□□ -1.71
GABPAQ06546 GTF2H2B-203ENST00000508065 1432 ntBASIC4.34□□□□□ -1.71
GABPAQ06546 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.34□□□□□ -1.71
GABPAQ06546 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.34□□□□□ -1.72
GABPAQ06546 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.34□□□□□ -1.72
GABPAQ06546 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
GABPAQ06546 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
GABPAQ06546 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
GABPAQ06546 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.33□□□□□ -1.72
GABPAQ06546 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GABPAQ06546 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GABPAQ06546 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GABPAQ06546 RNU6-792P-201ENST00000363490 107 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 SNORD74.4-201ENST00000364129 80 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 SNORD46.1-201ENST00000364139 104 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 MIR92A2-201ENST00000385299 75 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 LINC01347-201ENST00000417964 355 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.33□□□□□ -1.72
GABPAQ06546 AC099336.2-201ENST00000422457 254 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.33□□□□□ -1.72
GABPAQ06546 PRDX3P3-201ENST00000447765 522 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 AC098824.1-201ENST00000453565 980 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GABPAQ06546 AC099560.2-201ENST00000457554 255 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.33□□□□□ -1.72
GABPAQ06546 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 RNU6-467P-201ENST00000517027 110 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GABPAQ06546 OR4R2P-201ENST00000530815 597 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.33□□□□□ -1.72
GABPAQ06546 OR5B10P-201ENST00000532869 642 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.33□□□□□ -1.72
GABPAQ06546 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.33□□□□□ -1.72
GABPAQ06546 ZNF92P3-201ENST00000596594 954 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.33□□□□□ -1.72
GABPAQ06546 AC005776.1-201ENST00000603164 290 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 AC092354.2-201ENST00000607786 514 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 AP003392.5-201ENST00000607857 415 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 AC019176.2-201ENST00000611579 315 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 AC243312.2-201ENST00000623340 601 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 CFTRP2-201ENST00000634304 199 ntBASIC4.33□□□□□ -1.72
GABPAQ06546 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.33□□□□□ -1.72
GABPAQ06546 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.33□□□□□ -1.72
GABPAQ06546 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
GABPAQ06546 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
GABPAQ06546 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GABPAQ06546 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.33□□□□□ -1.72
GABPAQ06546 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GABPAQ06546 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
GABPAQ06546 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.32□□□□□ -1.72
GABPAQ06546 AL627171.1-201ENST00000618845 1308 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
GABPAQ06546 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GABPAQ06546 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GABPAQ06546 RNU6-317P-201ENST00000384031 107 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 RNU6-1005P-201ENST00000384519 107 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 LAP3P1-201ENST00000403648 294 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AL121834.1-202ENST00000404494 277 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 ATF1P1-201ENST00000406040 927 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AC245052.5-201ENST00000416320 649 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 TRGV6-201ENST00000417928 299 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.32□□□□□ -1.72
GABPAQ06546 AL159987.2-201ENST00000432754 307 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AL031663.1-201ENST00000437445 219 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AL353093.1-201ENST00000441292 436 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 RBMY2UP-201ENST00000453474 324 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AC010469.1-201ENST00000463864 576 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 RPL5P30-201ENST00000465511 891 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AC078857.1-201ENST00000469870 667 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.32□□□□□ -1.72
GABPAQ06546 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.32□□□□□ -1.72
GABPAQ06546 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.32□□□□□ -1.72
GABPAQ06546 DEFB109D-201ENST00000529497 240 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.32□□□□□ -1.72
GABPAQ06546 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.32□□□□□ -1.72
GABPAQ06546 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.32□□□□□ -1.72
GABPAQ06546 MTND4LP25-201ENST00000570218 163 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.32□□□□□ -1.72
GABPAQ06546 MIR3944-201ENST00000581277 108 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AC010200.2-201ENST00000605098 235 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 U3.45-201ENST00000607547 219 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AC116447.1-201ENST00000613153 453 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AC012314.7-201ENST00000619693 93 ntBASIC4.32□□□□□ -1.72
GABPAQ06546 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms