Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL365184.2-201ENST00000431139 435 ntBASIC4.31□□□□□ -1.72
SOX2P48431 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SOX2P48431 AL138899.2-201ENST00000439139 499 ntBASIC4.31□□□□□ -1.72
SOX2P48431 UBE2V1P3-201ENST00000439651 417 ntBASIC4.31□□□□□ -1.72
SOX2P48431 DNAJC19P1-201ENST00000455312 319 ntBASIC4.31□□□□□ -1.72
SOX2P48431 AC097493.1-201ENST00000463958 372 ntBASIC4.31□□□□□ -1.72
SOX2P48431 AC108751.2-201ENST00000469993 231 ntBASIC4.31□□□□□ -1.72
SOX2P48431 NIP7P2-201ENST00000485801 544 ntBASIC4.31□□□□□ -1.72
SOX2P48431 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.31□□□□□ -1.72
SOX2P48431 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SOX2P48431 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.31□□□□□ -1.72
SOX2P48431 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.31□□□□□ -1.72
SOX2P48431 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.31□□□□□ -1.72
SOX2P48431 NPM1P6-201ENST00000521088 871 ntBASIC4.31□□□□□ -1.72
SOX2P48431 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.31□□□□□ -1.72
SOX2P48431 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.31□□□□□ -1.72
SOX2P48431 AC024940.3-201ENST00000538551 316 ntBASIC4.31□□□□□ -1.72
SOX2P48431 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.31□□□□□ -1.72
SOX2P48431 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.31□□□□□ -1.72
SOX2P48431 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.31□□□□□ -1.72
SOX2P48431 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.31□□□□□ -1.72
SOX2P48431 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.31□□□□□ -1.72
SOX2P48431 AP000894.4-201ENST00000610185 483 ntBASIC4.31□□□□□ -1.72
SOX2P48431 AL049794.2-201ENST00000616301 365 ntBASIC4.31□□□□□ -1.72
SOX2P48431 AC012414.7-202ENST00000622705 1090 ntBASIC4.31□□□□□ -1.72
SOX2P48431 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.31□□□□□ -1.72
SOX2P48431 MIR1910-201ENST00000636955 80 ntBASIC4.31□□□□□ -1.72
SOX2P48431 OR5BE1P-202ENST00000641168 1176 ntBASIC4.31□□□□□ -1.72
SOX2P48431 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
SOX2P48431 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SOX2P48431 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
SOX2P48431 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SOX2P48431 AL031985.3-201ENST00000565390 2449 ntBASIC4.31□□□□□ -1.72
SOX2P48431 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.31□□□□□ -1.72
SOX2P48431 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX2P48431 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX2P48431 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SOX2P48431 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.3□□□□□ -1.72
SOX2P48431 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.3□□□□□ -1.72
SOX2P48431 OR4G11P-202ENST00000642116 1414 ntBASIC4.3□□□□□ -1.72
SOX2P48431 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
SOX2P48431 AC092435.4-201ENST00000623012 4159 ntBASIC4.3□□□□□ -1.72
SOX2P48431 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SOX2P48431 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.3□□□□□ -1.72
SOX2P48431 DDX18P3-201ENST00000404856 2007 ntBASIC4.3□□□□□ -1.72
SOX2P48431 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 FGF7P2-201ENST00000332473 296 ntBASIC4.3□□□□□ -1.72
SOX2P48431 Y_RNA.359-201ENST00000365498 102 ntBASIC4.3□□□□□ -1.72
SOX2P48431 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 RNU6-921P-201ENST00000384361 107 ntBASIC4.3□□□□□ -1.72
SOX2P48431 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SOX2P48431 RN7SKP126-201ENST00000411143 300 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AF274854.1-201ENST00000413236 615 ntBASIC4.3□□□□□ -1.72
SOX2P48431 HMGB1P11-201ENST00000413899 637 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.3□□□□□ -1.72
SOX2P48431 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SOX2P48431 AC108075.1-201ENST00000424692 529 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AL158073.1-201ENST00000426848 1104 ntBASIC4.3□□□□□ -1.72
SOX2P48431 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.3□□□□□ -1.72
SOX2P48431 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 NMNAT1P2-201ENST00000435192 860 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.3□□□□□ -1.72
SOX2P48431 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 EEF1E1P1-201ENST00000446998 430 ntBASIC4.3□□□□□ -1.72
SOX2P48431 EEF1A1P1-201ENST00000447052 739 ntBASIC4.3□□□□□ -1.72
SOX2P48431 VN1R10P-201ENST00000447106 875 ntBASIC4.3□□□□□ -1.72
SOX2P48431 RPL39P6-201ENST00000448289 150 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 IGHV5-78-201ENST00000450948 295 ntBASIC4.3□□□□□ -1.72
SOX2P48431 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.3□□□□□ -1.72
SOX2P48431 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 MTCO3P2-201ENST00000457365 171 ntBASIC4.3□□□□□ -1.72
SOX2P48431 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.3□□□□□ -1.72
SOX2P48431 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SOX2P48431 CDC42P4-201ENST00000510507 563 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.3□□□□□ -1.72
SOX2P48431 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.3□□□□□ -1.72
SOX2P48431 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 RNU6-720P-201ENST00000516363 108 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.3□□□□□ -1.72
SOX2P48431 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.3□□□□□ -1.72
SOX2P48431 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.3□□□□□ -1.72
SOX2P48431 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.3□□□□□ -1.72
SOX2P48431 AC104785.1-201ENST00000603220 588 ntBASIC4.3□□□□□ -1.72
SOX2P48431 BNIP3P11-201ENST00000603878 563 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AL136363.2-201ENST00000604173 851 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AC115286.1-201ENST00000604298 434 ntBASIC4.3□□□□□ -1.72
SOX2P48431 HSPE1P14-201ENST00000605812 302 ntBASIC4.3□□□□□ -1.72
SOX2P48431 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms