Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC117525.1-201ENST00000515228 503 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.56□□□□□ -1.84
CXCL12P48061 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.56□□□□□ -1.84
CXCL12P48061 UBE2NP1-201ENST00000545592 458 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 TRAV15-201ENST00000556680 249 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 MTND6P33-201ENST00000571794 183 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.56□□□□□ -1.84
CXCL12P48061 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.56□□□□□ -1.84
CXCL12P48061 AC068020.1-201ENST00000594215 661 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 AC125494.3-201ENST00000602759 455 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 MRPS35P3-201ENST00000603189 709 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 AC011816.2-201ENST00000607089 556 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 RMST_9.1-201ENST00000619945 193 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 AC067852.7-201ENST00000623270 535 ntBASIC3.56□□□□□ -1.84
CXCL12P48061 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CXCL12P48061 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CXCL12P48061 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL12P48061 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.55□□□□□ -1.84
CXCL12P48061 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL12P48061 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL12P48061 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL12P48061 AC093719.1-202ENST00000392735 373 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 RPL5P19-201ENST00000404228 893 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 MTCYBP7-201ENST00000419540 1134 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.55□□□□□ -1.84
CXCL12P48061 AC127537.2-201ENST00000439258 465 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.55□□□□□ -1.84
CXCL12P48061 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.55□□□□□ -1.84
CXCL12P48061 RPS3AP14-201ENST00000483907 780 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 HMGB3P14-201ENST00000494195 599 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 RN7SL504P-201ENST00000494496 287 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL12P48061 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.55□□□□□ -1.84
CXCL12P48061 IGKV2-26-201ENST00000518305 343 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 MYL12AP1-201ENST00000518490 515 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 UBTFL9-201ENST00000534504 1148 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 AC023161.2-201ENST00000551218 780 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 LARP7P3-201ENST00000579888 337 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL12P48061 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.55□□□□□ -1.84
CXCL12P48061 AL139286.1-201ENST00000604465 483 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 AC007620.3-201ENST00000608131 497 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 AL133370.2-201ENST00000619934 439 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.55□□□□□ -1.84
CXCL12P48061 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL12P48061 AL133412.1-201ENST00000380194 2992 ntBASIC3.55□□□□□ -1.84
CXCL12P48061 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CXCL12P48061 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.55□□□□□ -1.84
CXCL12P48061 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
CXCL12P48061 AC119744.1-201ENST00000454746 1715 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL12P48061 RPL23AP57-201ENST00000332361 466 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CXCL12P48061 RNA5SP374-201ENST00000362939 125 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 RNU6-819P-201ENST00000364116 107 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL12P48061 Y_RNA.510-201ENST00000384511 114 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 AC104297.1-201ENST00000393779 870 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 RPS26P47-201ENST00000427219 348 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.54□□□□□ -1.84
CXCL12P48061 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL12P48061 NDUFS5P3-201ENST00000450668 321 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 AC069277.2-201ENST00000454211 432 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.54□□□□□ -1.84
CXCL12P48061 AP001992.1-205ENST00000462248 379 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL12P48061 S100A11P2-201ENST00000467589 312 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.54□□□□□ -1.84
CXCL12P48061 TRBV12-2-201ENST00000489763 344 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 RPS6P4-201ENST00000494693 758 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.54□□□□□ -1.84
CXCL12P48061 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL12P48061 AC104997.1-201ENST00000519761 717 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL12P48061 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.54□□□□□ -1.84
CXCL12P48061 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.54□□□□□ -1.84
CXCL12P48061 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.54□□□□□ -1.84
CXCL12P48061 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.54□□□□□ -1.84
CXCL12P48061 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.54□□□□□ -1.84
CXCL12P48061 AC079791.1-201ENST00000605356 973 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 OR6R2P-201ENST00000609216 300 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 AL162274.2-201ENST00000614406 332 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 OR5AC4P-202ENST00000642086 985 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 MAPK10-373ENST00000641983 6772 ntBASIC3.54□□□□□ -1.84
CXCL12P48061 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CXCL12P48061 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CXCL12P48061 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.53□□□□□ -1.84
CXCL12P48061 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CXCL12P48061 RNU6-1251P-201ENST00000364502 107 ntBASIC3.53□□□□□ -1.84
CXCL12P48061 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL12P48061 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CXCL12P48061 AL034403.1-201ENST00000399414 885 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms