Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
FDFT1P37268 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 AC068538.1-201ENST00000376856 336 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 RNU6-98P-201ENST00000384173 107 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 MIR141-201ENST00000384975 95 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 NPM1P10-201ENST00000398310 865 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 AL391417.1-201ENST00000404100 426 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.79□□□□□ -1.8
FDFT1P37268 C4BPAP2-201ENST00000428434 478 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 MTND4LP14-201ENST00000429447 288 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.79□□□□□ -1.8
FDFT1P37268 OR4C10P-201ENST00000434991 931 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 RPL7P29-201ENST00000437151 728 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.79□□□□□ -1.8
FDFT1P37268 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.79□□□□□ -1.8
FDFT1P37268 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.79□□□□□ -1.8
FDFT1P37268 RPL37P6-202ENST00000464216 403 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 RPS20P21-201ENST00000466859 343 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.79□□□□□ -1.8
FDFT1P37268 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.79□□□□□ -1.8
FDFT1P37268 RPL23AP73-201ENST00000492507 471 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 AC068305.1-201ENST00000497406 726 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.79□□□□□ -1.8
FDFT1P37268 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.79□□□□□ -1.8
FDFT1P37268 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.79□□□□□ -1.8
FDFT1P37268 AC010460.1-201ENST00000507087 466 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.79□□□□□ -1.8
FDFT1P37268 MTCO1P35-201ENST00000515270 228 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 SCARNA14-201ENST00000516903 136 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 MIR2116-201ENST00000517221 80 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.79□□□□□ -1.8
FDFT1P37268 AC008562.1-201ENST00000521763 330 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
FDFT1P37268 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.79□□□□□ -1.8
FDFT1P37268 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.79□□□□□ -1.8
FDFT1P37268 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.79□□□□□ -1.8
FDFT1P37268 AGGF1P8-201ENST00000562979 1000 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.79□□□□□ -1.8
FDFT1P37268 AC005242.1-201ENST00000585658 438 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 AC015802.5-201ENST00000607478 399 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 AL136295.6-201ENST00000610486 658 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 FP236240.3-201ENST00000623061 327 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 AC020978.9-201ENST00000624380 1141 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.79□□□□□ -1.8
FDFT1P37268 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.79□□□□□ -1.8
FDFT1P37268 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 HSPA8P19-201ENST00000505359 1517 ntBASIC3.79□□□□□ -1.8
FDFT1P37268 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
FDFT1P37268 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FDFT1P37268 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FDFT1P37268 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FDFT1P37268 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.78□□□□□ -1.8
FDFT1P37268 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FDFT1P37268 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FDFT1P37268 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FDFT1P37268 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
FDFT1P37268 RNA5SP391-201ENST00000363456 119 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
FDFT1P37268 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
FDFT1P37268 SNORA70E-201ENST00000384492 135 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
FDFT1P37268 MTND3P20-201ENST00000407663 186 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 TCEA1P4-201ENST00000415066 844 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.78□□□□□ -1.8
FDFT1P37268 MTCO3P4-201ENST00000419236 787 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 RPL7P53-201ENST00000421245 739 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 CR848007.2-201ENST00000424918 787 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FDFT1P37268 AC006989.1-201ENST00000427212 131 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.78□□□□□ -1.8
FDFT1P37268 AL035458.1-201ENST00000433096 585 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.78□□□□□ -1.8
FDFT1P37268 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.78□□□□□ -1.8
FDFT1P37268 XKRY2-201ENST00000442362 1093 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 AC004801.2-202ENST00000463559 283 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.78□□□□□ -1.8
FDFT1P37268 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FDFT1P37268 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.78□□□□□ -1.8
FDFT1P37268 RN7SKP141-201ENST00000516167 338 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 RNU6-352P-201ENST00000516908 107 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
FDFT1P37268 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.78□□□□□ -1.8
FDFT1P37268 COX6B1P6-201ENST00000522347 255 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 HAUS1P3-201ENST00000523909 662 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.78□□□□□ -1.8
FDFT1P37268 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.78□□□□□ -1.8
FDFT1P37268 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.78□□□□□ -1.8
FDFT1P37268 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.78□□□□□ -1.8
FDFT1P37268 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.78□□□□□ -1.8
FDFT1P37268 AL355802.4-201ENST00000607635 548 ntBASIC3.78□□□□□ -1.8
FDFT1P37268 AC239803.2-201ENST00000610161 430 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms