Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC004943.3-201ENST00000624116 600 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 FRG1DP-201ENST00000635586 771 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SHMT2P34897 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SHMT2P34897 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
SHMT2P34897 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
SHMT2P34897 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHMT2P34897 RNF6P1-201ENST00000444889 1784 ntBASIC3.71□□□□□ -1.82
SHMT2P34897 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHMT2P34897 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHMT2P34897 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.7□□□□□ -1.82
SHMT2P34897 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SHMT2P34897 HMGB1P10-201ENST00000395823 563 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC025750.1-201ENST00000399891 379 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 CYCSP19-201ENST00000411715 316 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.7□□□□□ -1.82
SHMT2P34897 RPL21P109-201ENST00000422213 475 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 AC009965.2-201ENST00000425328 970 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 AL591419.1-201ENST00000427423 339 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 AC073508.1-201ENST00000428866 656 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 RPS24P8-201ENST00000431490 402 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.7□□□□□ -1.82
SHMT2P34897 MTND4P15-201ENST00000437913 1033 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC092809.1-201ENST00000441469 474 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.7□□□□□ -1.82
SHMT2P34897 SETD6P1-201ENST00000444575 317 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.7□□□□□ -1.82
SHMT2P34897 MTND2P8-201ENST00000450555 1025 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHMT2P34897 MTCO3P16-201ENST00000454456 754 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC010307.1-201ENST00000467206 836 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 AC007688.1-201ENST00000475592 759 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.7□□□□□ -1.82
SHMT2P34897 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC108941.1-201ENST00000502853 530 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.7□□□□□ -1.82
SHMT2P34897 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.7□□□□□ -1.82
SHMT2P34897 SMARCE1P4-201ENST00000523647 241 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC087499.8-201ENST00000578406 226 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.7□□□□□ -1.82
SHMT2P34897 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.7□□□□□ -1.82
SHMT2P34897 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.7□□□□□ -1.82
SHMT2P34897 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.7□□□□□ -1.82
SHMT2P34897 MIR1264-201ENST00000616374 69 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.7□□□□□ -1.82
SHMT2P34897 AL713922.2-201ENST00000619384 716 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.7□□□□□ -1.82
SHMT2P34897 AC091948.2-201ENST00000636510 279 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 AC066616.2-201ENST00000559334 1481 ntBASIC3.7□□□□□ -1.82
SHMT2P34897 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHMT2P34897 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.7□□□□□ -1.82
SHMT2P34897 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SHMT2P34897 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHMT2P34897 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHMT2P34897 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHMT2P34897 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHMT2P34897 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.69□□□□□ -1.82
SHMT2P34897 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHMT2P34897 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHMT2P34897 RNU6-317P-201ENST00000384031 107 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 MIR554-201ENST00000384874 96 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AL590704.1-201ENST00000402856 794 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 RPL31P52-201ENST00000407532 367 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 RNU6ATAC-201ENST00000408749 126 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.69□□□□□ -1.82
SHMT2P34897 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.69□□□□□ -1.82
SHMT2P34897 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.69□□□□□ -1.82
SHMT2P34897 MTND2P15-201ENST00000418575 892 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 RPL36AP36-201ENST00000418616 301 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.69□□□□□ -1.82
SHMT2P34897 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.69□□□□□ -1.82
SHMT2P34897 RPL7P53-201ENST00000421245 739 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.69□□□□□ -1.82
SHMT2P34897 OR5AW1P-201ENST00000426334 1006 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AL031663.1-201ENST00000437445 219 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 RRM2P4-201ENST00000441721 562 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AC069540.1-201ENST00000446320 988 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AL353718.1-201ENST00000451028 517 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 HMGB3P21-201ENST00000452483 547 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 MTND2P30-201ENST00000456663 382 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.69□□□□□ -1.82
SHMT2P34897 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SHMT2P34897 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.69□□□□□ -1.82
SHMT2P34897 FTH1P9-201ENST00000513251 355 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AC022695.1-201ENST00000522089 237 ntBASIC3.69□□□□□ -1.82
SHMT2P34897 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SHMT2P34897 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.69□□□□□ -1.82
SHMT2P34897 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms