Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA9P31269 AC091390.3-201ENST00000426478 338 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 AF228730.2-201ENST00000438784 848 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 EXTL2P1-201ENST00000446218 416 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 C1DP3-201ENST00000455013 423 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 AC007967.1-201ENST00000455422 1159 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 RPL31P53-201ENST00000457065 348 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA9P31269 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
HOXA9P31269 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA9P31269 AC026784.1-201ENST00000507986 352 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.87□□□□□ -1.79
HOXA9P31269 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA9P31269 RNU6-362P-201ENST00000516736 90 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.87□□□□□ -1.79
HOXA9P31269 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA9P31269 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 ZNF415P1-201ENST00000582279 1166 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 BX322635.1-201ENST00000605804 496 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA9P31269 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA9P31269 AC243654.2-201ENST00000612843 443 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 AL442067.2-201ENST00000614033 363 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 AL031985.3-201ENST00000565390 2449 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 FAM35DP-201ENST00000323387 2712 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA9P31269 AC138393.1-206ENST00000540997 1886 ntBASIC3.87□□□□□ -1.79
HOXA9P31269 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA9P31269 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA9P31269 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXA9P31269 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA9P31269 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA9P31269 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA9P31269 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA9P31269 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA9P31269 RNA5SP322-201ENST00000363617 119 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 RNA5SP267-201ENST00000364893 126 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXA9P31269 AL391219.1-201ENST00000422570 483 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 AC097713.2-201ENST00000430199 356 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXA9P31269 AC073063.1-201ENST00000434352 607 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.86□□□□□ -1.79
HOXA9P31269 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXA9P31269 RPS15AP29-201ENST00000445539 400 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXA9P31269 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXA9P31269 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXA9P31269 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXA9P31269 ATG10-AS1-201ENST00000504846 648 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 SNORA70.14-201ENST00000516205 110 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.86□□□□□ -1.79
HOXA9P31269 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.86□□□□□ -1.79
HOXA9P31269 OR4C2P-201ENST00000530855 1064 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 AL590410.1-201ENST00000617925 333 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA9P31269 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA9P31269 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA9P31269 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HOXA9P31269 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.86□□□□□ -1.79
HOXA9P31269 AC066616.2-201ENST00000559334 1481 ntBASIC3.86□□□□□ -1.79
HOXA9P31269 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
HOXA9P31269 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA9P31269 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
HOXA9P31269 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA9P31269 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA9P31269 RNA5SP50-201ENST00000363731 107 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXA9P31269 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXA9P31269 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HOXA9P31269 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA9P31269 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA9P31269 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA9P31269 AC245054.1-201ENST00000420944 258 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 AJ239321.1-201ENST00000424255 564 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 HIGD1AP12-201ENST00000427832 281 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 AL356535.1-201ENST00000440335 398 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA9P31269 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA9P31269 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXA9P31269 AC098824.1-201ENST00000453565 980 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXA9P31269 AC006511.1-201ENST00000470614 315 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 RN7SL601P-201ENST00000471221 293 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA9P31269 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA9P31269 RNA5SP208-201ENST00000516156 78 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXA9P31269 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXA9P31269 AC067805.1-201ENST00000559344 470 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 MIR3200-201ENST00000580767 85 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 MRPS35P3-201ENST00000603189 709 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 AL163642.2-201ENST00000604722 1019 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXA9P31269 AC069209.1-201ENST00000619282 651 ntBASIC3.85□□□□□ -1.79
HOXA9P31269 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXA9P31269 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HOXA9P31269 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms