Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40P25942 RN7SKP82-201ENST00000516786 223 ntBASIC4.88□□□□□ -1.63
CD40P25942 IGKV2-18-201ENST00000522607 343 ntBASIC4.88□□□□□ -1.63
CD40P25942 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.88□□□□□ -1.63
CD40P25942 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.88□□□□□ -1.63
CD40P25942 AC090022.1-201ENST00000546569 311 ntBASIC4.88□□□□□ -1.63
CD40P25942 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40P25942 AC099489.2-201ENST00000574976 260 ntBASIC4.88□□□□□ -1.63
CD40P25942 SLC25A36P1-201ENST00000590111 465 ntBASIC4.88□□□□□ -1.63
CD40P25942 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40P25942 AL391813.2-201ENST00000609113 322 ntBASIC4.88□□□□□ -1.63
CD40P25942 Z95327.3-201ENST00000610385 572 ntBASIC4.88□□□□□ -1.63
CD40P25942 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40P25942 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40P25942 LINC01963-201ENST00000562038 3148 ntBASIC4.88□□□□□ -1.63
CD40P25942 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CD40P25942 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CD40P25942 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40P25942 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40P25942 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40P25942 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40P25942 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CD40P25942 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD40P25942 STX3-208ENST00000641815 3236 ntBASIC4.87□□□□□ -1.63
CD40P25942 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.87□□□□□ -1.63
CD40P25942 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD40P25942 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC4.87□□□□□ -1.63
CD40P25942 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40P25942 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD40P25942 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD40P25942 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD40P25942 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40P25942 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD40P25942 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD40P25942 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD40P25942 AL031595.2-201ENST00000624215 19071 ntBASIC4.87□□□□□ -1.63
CD40P25942 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40P25942 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CD40P25942 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40P25942 RNA5SP258-201ENST00000362750 119 ntBASIC4.87□□□□□ -1.63
CD40P25942 RNA5SP319-201ENST00000362768 119 ntBASIC4.87□□□□□ -1.63
CD40P25942 RNU6-1090P-201ENST00000364065 94 ntBASIC4.87□□□□□ -1.63
CD40P25942 Y_RNA.303-201ENST00000364998 94 ntBASIC4.87□□□□□ -1.63
CD40P25942 RNU6-282P-201ENST00000365357 103 ntBASIC4.87□□□□□ -1.63
CD40P25942 Y_RNA.402-201ENST00000383972 102 ntBASIC4.87□□□□□ -1.63
CD40P25942 RNU6-1103P-201ENST00000384150 107 ntBASIC4.87□□□□□ -1.63
CD40P25942 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.87□□□□□ -1.63
CD40P25942 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40P25942 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.87□□□□□ -1.63
CD40P25942 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40P25942 MTND3P17-201ENST00000416968 344 ntBASIC4.87□□□□□ -1.63
CD40P25942 AC127526.1-201ENST00000417526 366 ntBASIC4.87□□□□□ -1.63
CD40P25942 MTCO2P11-201ENST00000431069 680 ntBASIC4.87□□□□□ -1.63
CD40P25942 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40P25942 BTF3P10-201ENST00000433415 495 ntBASIC4.87□□□□□ -1.63
CD40P25942 HMGB1P31-201ENST00000437242 427 ntBASIC4.87□□□□□ -1.63
CD40P25942 CYCSP51-201ENST00000443545 318 ntBASIC4.87□□□□□ -1.63
CD40P25942 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40P25942 RPS4XP10-201ENST00000465034 731 ntBASIC4.87□□□□□ -1.63
CD40P25942 AL133445.1-201ENST00000467051 452 ntBASIC4.87□□□□□ -1.63
CD40P25942 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40P25942 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40P25942 RPS4XP18-201ENST00000495480 763 ntBASIC4.87□□□□□ -1.63
CD40P25942 FCF1P3-201ENST00000496394 590 ntBASIC4.87□□□□□ -1.63
CD40P25942 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40P25942 BX510359.5-201ENST00000515651 304 ntBASIC4.87□□□□□ -1.63
CD40P25942 Vault.3-201ENST00000516676 95 ntBASIC4.87□□□□□ -1.63
CD40P25942 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40P25942 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40P25942 AP000907.2-201ENST00000530827 353 ntBASIC4.87□□□□□ -1.63
CD40P25942 AC118273.2-201ENST00000532092 465 ntBASIC4.87□□□□□ -1.63
CD40P25942 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40P25942 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CD40P25942 AL356432.3-201ENST00000568952 465 ntBASIC4.87□□□□□ -1.63
CD40P25942 MIR4489-201ENST00000578869 62 ntBASIC4.87□□□□□ -1.63
CD40P25942 MIR4311-201ENST00000580794 100 ntBASIC4.87□□□□□ -1.63
CD40P25942 MIR3118-1-201ENST00000581787 76 ntBASIC4.87□□□□□ -1.63
CD40P25942 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40P25942 AC011840.5-201ENST00000582125 771 ntBASIC4.87□□□□□ -1.63
CD40P25942 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40P25942 AC093388.1-201ENST00000609166 430 ntBASIC4.87□□□□□ -1.63
CD40P25942 AL355472.4-201ENST00000610233 626 ntBASIC4.87□□□□□ -1.63
CD40P25942 AL512624.1-201ENST00000613638 469 ntBASIC4.87□□□□□ -1.63
CD40P25942 AL049794.2-201ENST00000616301 365 ntBASIC4.87□□□□□ -1.63
CD40P25942 AC091953.2-201ENST00000623979 160 ntBASIC4.87□□□□□ -1.63
CD40P25942 AC079597.1-201ENST00000624306 508 ntBASIC4.87□□□□□ -1.63
CD40P25942 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.87□□□□□ -1.63
CD40P25942 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.87□□□□□ -1.63
CD40P25942 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.87□□□□□ -1.63
CD40P25942 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.87□□□□□ -1.63
CD40P25942 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
CD40P25942 MTND5P33-201ENST00000571250 1450 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms