Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.09□□□□□ -1.6
POLR2AP24928 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.09□□□□□ -1.6
POLR2AP24928 AC004938.1-201ENST00000438468 308 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 AC092641.1-201ENST00000440229 772 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 NECAP1P2-201ENST00000455668 727 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 RPS4XP15-201ENST00000489210 795 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 AC008549.1-201ENST00000512900 643 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 AC026403.1-201ENST00000518938 295 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.09□□□□□ -1.6
POLR2AP24928 AC007991.1-201ENST00000522680 631 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.09□□□□□ -1.6
POLR2AP24928 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.09□□□□□ -1.6
POLR2AP24928 AL121766.1-201ENST00000547436 487 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.09□□□□□ -1.6
POLR2AP24928 MIR4999-201ENST00000585029 91 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 VN1R83P-201ENST00000595685 445 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.09□□□□□ -1.6
POLR2AP24928 AC073544.2-201ENST00000601155 540 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 AL161729.3-201ENST00000603533 673 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 AC079587.1-201ENST00000603846 277 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 AL592221.1-201ENST00000605266 382 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 AC019176.2-201ENST00000611579 315 ntBASIC5.09□□□□□ -1.6
POLR2AP24928 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
POLR2AP24928 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.09□□□□□ -1.6
POLR2AP24928 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
POLR2AP24928 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
POLR2AP24928 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.08□□□□□ -1.6
POLR2AP24928 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
POLR2AP24928 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
POLR2AP24928 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
POLR2AP24928 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
POLR2AP24928 AL359922.3-201ENST00000624779 1670 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
POLR2AP24928 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
POLR2AP24928 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
POLR2AP24928 SNORA73.2-201ENST00000364946 201 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.08□□□□□ -1.6
POLR2AP24928 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
POLR2AP24928 RPS3AP24-201ENST00000407896 734 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.08□□□□□ -1.6
POLR2AP24928 Z99497.1-201ENST00000421282 135 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.08□□□□□ -1.6
POLR2AP24928 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.08□□□□□ -1.6
POLR2AP24928 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.08□□□□□ -1.6
POLR2AP24928 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.08□□□□□ -1.6
POLR2AP24928 RPL35AP21-201ENST00000437667 333 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 MTND1P30-201ENST00000441241 901 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.08□□□□□ -1.6
POLR2AP24928 MTCO3P38-201ENST00000468910 766 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 AC025459.1-201ENST00000504072 156 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.08□□□□□ -1.6
POLR2AP24928 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.08□□□□□ -1.6
POLR2AP24928 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.08□□□□□ -1.6
POLR2AP24928 AC108120.2-201ENST00000512973 294 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.08□□□□□ -1.6
POLR2AP24928 AC114781.4-201ENST00000513707 639 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 SNORA31.13-201ENST00000516624 135 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
POLR2AP24928 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.08□□□□□ -1.6
POLR2AP24928 TVP23BP1-201ENST00000557500 617 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.08□□□□□ -1.6
POLR2AP24928 EIF1P4-201ENST00000572664 335 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.08□□□□□ -1.6
POLR2AP24928 AC096553.1-201ENST00000605169 829 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 LARP7P1-201ENST00000605576 316 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 AC069234.5-201ENST00000611056 416 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
POLR2AP24928 AC104985.2-201ENST00000620598 500 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.08□□□□□ -1.6
POLR2AP24928 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
POLR2AP24928 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.08□□□□□ -1.6
POLR2AP24928 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
POLR2AP24928 AC000367.1-201ENST00000452711 1766 ntBASIC5.08□□□□□ -1.6
POLR2AP24928 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
POLR2AP24928 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.08□□□□□ -1.6
POLR2AP24928 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
POLR2AP24928 METTL21EP-201ENST00000298105 713 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 RNA5SP151-201ENST00000365632 117 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.07□□□□□ -1.6
POLR2AP24928 Y_RNA.553-201ENST00000384670 102 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.07□□□□□ -1.6
POLR2AP24928 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.07□□□□□ -1.6
POLR2AP24928 HMGN2P31-201ENST00000432430 273 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 UBE2V1P7-201ENST00000446395 340 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 snoU13.24-201ENST00000458998 104 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
POLR2AP24928 AC020890.1-201ENST00000491837 504 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
POLR2AP24928 HPRT1P2-201ENST00000505250 544 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.07□□□□□ -1.6
POLR2AP24928 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.07□□□□□ -1.6
POLR2AP24928 IGHV3-32-201ENST00000519182 355 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.07□□□□□ -1.6
POLR2AP24928 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.07□□□□□ -1.6
POLR2AP24928 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.07□□□□□ -1.6
POLR2AP24928 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.07□□□□□ -1.6
POLR2AP24928 AC011611.5-201ENST00000552477 578 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 AADACP1-206ENST00000561502 1193 ntBASIC5.07□□□□□ -1.6
POLR2AP24928 ACTR3BP3-201ENST00000565577 979 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms