Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 UBE2V1P9-201ENST00000414760 368 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 MTCYBP24-201ENST00000420387 1106 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 OR2X1P-201ENST00000421144 687 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 COX6CP15-201ENST00000426313 211 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 DEFB130D-201ENST00000426866 237 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 UBE2D3P3-201ENST00000426992 425 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 GXYLT1P1-201ENST00000446657 490 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 NPM1P49-201ENST00000448027 714 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 RPL9P32-201ENST00000464118 620 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC007688.1-201ENST00000475592 759 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 NCOR1P1-202ENST00000486162 291 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 RN7SL604P-201ENST00000492589 296 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 RNF138P1-201ENST00000502765 546 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 MTCO2P9-201ENST00000503214 694 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC023141.12-201ENST00000512399 199 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 RNA5SP154-201ENST00000516193 111 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 RNU7-143P-201ENST00000516781 65 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 CYCSP29-201ENST00000533731 318 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 RFPL1S-203ENST00000539579 330 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC093510.2-201ENST00000562820 896 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC090616.5-202ENST00000582111 297 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AC005776.1-201ENST00000603164 290 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 AP004247.3-201ENST00000608682 624 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 MIR7151-201ENST00000617477 60 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 SAGE4P-201ENST00000442271 3381 ntBASIC4.15□□□□□ -1.75
HLA-DPA1P20036 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HLA-DPA1P20036 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC095050.2-201ENST00000510748 1458 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 SNORA37-201ENST00000384504 129 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 SNORA70C-201ENST00000384538 135 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 EIF5P1-201ENST00000400019 1231 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 SSXP10-201ENST00000402595 565 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 RNU2-72P-201ENST00000411175 163 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC108032.1-201ENST00000416706 207 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 RPS3AP9-201ENST00000417027 792 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 RPS27AP12-201ENST00000429552 465 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 RPL38P1-201ENST00000460914 211 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC092451.1-201ENST00000480211 153 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 RN7SL271P-201ENST00000487601 295 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC005726.1-201ENST00000494679 427 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC025445.1-201ENST00000502728 300 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC025554.1-201ENST00000505641 188 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 TOMM20P2-201ENST00000540082 421 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC007599.1-201ENST00000568688 1174 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 RPL23AP87-202ENST00000573039 466 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 MIR5684-201ENST00000585074 65 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC104662.1-201ENST00000604448 511 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AC114878.2-201ENST00000604863 1251 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 AL590396.4-201ENST00000636779 956 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 ZNF849P-201ENST00000594711 1566 ntBASIC4.14□□□□□ -1.75
HLA-DPA1P20036 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.14□□□□□ -1.75
HLA-DPA1P20036 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
HLA-DPA1P20036 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms