Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 ZNF826P-207ENST00000622273 1910 ntBASIC3.77□□□□□ -1.81
APOEP02649 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
APOEP02649 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
APOEP02649 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOEP02649 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOEP02649 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.76□□□□□ -1.81
APOEP02649 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOEP02649 ATP5F1P3-201ENST00000397213 657 ntBASIC3.76□□□□□ -1.81
APOEP02649 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.76□□□□□ -1.81
APOEP02649 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.76□□□□□ -1.81
APOEP02649 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.76□□□□□ -1.81
APOEP02649 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.76□□□□□ -1.81
APOEP02649 AL645931.1-201ENST00000439737 410 ntBASIC3.76□□□□□ -1.81
APOEP02649 RPS29P31-201ENST00000446147 164 ntBASIC3.76□□□□□ -1.81
APOEP02649 RAB28P3-201ENST00000448325 597 ntBASIC3.76□□□□□ -1.81
APOEP02649 AC022336.1-201ENST00000475510 337 ntBASIC3.76□□□□□ -1.81
APOEP02649 NPM1P17-201ENST00000479221 602 ntBASIC3.76□□□□□ -1.81
APOEP02649 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.76□□□□□ -1.81
APOEP02649 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.76□□□□□ -1.81
APOEP02649 AC023161.2-201ENST00000551218 780 ntBASIC3.76□□□□□ -1.81
APOEP02649 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.76□□□□□ -1.81
APOEP02649 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.76□□□□□ -1.81
APOEP02649 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.76□□□□□ -1.81
APOEP02649 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.76□□□□□ -1.81
APOEP02649 AL096803.3-201ENST00000609032 532 ntBASIC3.76□□□□□ -1.81
APOEP02649 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.76□□□□□ -1.81
APOEP02649 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.76□□□□□ -1.81
APOEP02649 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
APOEP02649 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
APOEP02649 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
APOEP02649 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
APOEP02649 AC090337.1-201ENST00000579651 2074 ntBASIC3.75□□□□□ -1.81
APOEP02649 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOEP02649 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.75□□□□□ -1.81
APOEP02649 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.75□□□□□ -1.81
APOEP02649 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
APOEP02649 SNORD9-201ENST00000362566 104 ntBASIC3.75□□□□□ -1.81
APOEP02649 MTHFD2P2-201ENST00000407725 247 ntBASIC3.75□□□□□ -1.81
APOEP02649 SNORA11-201ENST00000408789 128 ntBASIC3.75□□□□□ -1.81
APOEP02649 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.75□□□□□ -1.81
APOEP02649 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.75□□□□□ -1.81
APOEP02649 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.75□□□□□ -1.81
APOEP02649 SAGE2P-201ENST00000420011 2126 ntBASIC3.75□□□□□ -1.81
APOEP02649 ARL4AP4-201ENST00000434170 518 ntBASIC3.75□□□□□ -1.81
APOEP02649 MRPS18BP2-201ENST00000434310 759 ntBASIC3.75□□□□□ -1.81
APOEP02649 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.75□□□□□ -1.81
APOEP02649 AC044797.1-201ENST00000445744 679 ntBASIC3.75□□□□□ -1.81
APOEP02649 AC073387.1-201ENST00000453261 709 ntBASIC3.75□□□□□ -1.81
APOEP02649 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.75□□□□□ -1.81
APOEP02649 MTCYBP14-201ENST00000457471 715 ntBASIC3.75□□□□□ -1.81
APOEP02649 AC004801.2-202ENST00000463559 283 ntBASIC3.75□□□□□ -1.81
APOEP02649 AL035404.1-201ENST00000497982 568 ntBASIC3.75□□□□□ -1.81
APOEP02649 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.75□□□□□ -1.81
APOEP02649 SNORA70.17-201ENST00000516449 133 ntBASIC3.75□□□□□ -1.81
APOEP02649 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
APOEP02649 OR5AP1P-201ENST00000529730 940 ntBASIC3.75□□□□□ -1.81
APOEP02649 CYP2C60P-201ENST00000566088 139 ntBASIC3.75□□□□□ -1.81
APOEP02649 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.75□□□□□ -1.81
APOEP02649 MIR4738-201ENST00000579134 87 ntBASIC3.75□□□□□ -1.81
APOEP02649 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.75□□□□□ -1.81
APOEP02649 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.75□□□□□ -1.81
APOEP02649 AC020914.6-201ENST00000594327 272 ntBASIC3.75□□□□□ -1.81
APOEP02649 AC115621.1-201ENST00000604653 858 ntBASIC3.75□□□□□ -1.81
APOEP02649 AC012213.4-201ENST00000606457 354 ntBASIC3.75□□□□□ -1.81
APOEP02649 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.75□□□□□ -1.81
APOEP02649 AC016957.2-201ENST00000616998 848 ntBASIC3.75□□□□□ -1.81
APOEP02649 AL732372.2-225ENST00000642124 456 ntBASIC3.75□□□□□ -1.81
APOEP02649 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.75□□□□□ -1.81
APOEP02649 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOEP02649 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
APOEP02649 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
APOEP02649 MFSD8-236ENST00000641509 4050 ntBASIC3.75□□□□□ -1.81
APOEP02649 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
APOEP02649 AC073073.2-201ENST00000609827 2578 ntBASIC3.74□□□□□ -1.81
APOEP02649 SEPT7P7-201ENST00000420492 1301 ntBASIC3.74□□□□□ -1.81
APOEP02649 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
APOEP02649 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
APOEP02649 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.74□□□□□ -1.81
APOEP02649 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.74□□□□□ -1.81
APOEP02649 AP001148.1-201ENST00000624124 2359 ntBASIC3.74□□□□□ -1.81
APOEP02649 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.74□□□□□ -1.81
APOEP02649 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
APOEP02649 SNORA73.2-201ENST00000364946 201 ntBASIC3.74□□□□□ -1.81
APOEP02649 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
APOEP02649 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
APOEP02649 AC092832.1-201ENST00000422934 400 ntBASIC3.74□□□□□ -1.81
APOEP02649 HSPD1P21-201ENST00000436541 245 ntBASIC3.74□□□□□ -1.81
APOEP02649 MTCYBP31-201ENST00000438855 1122 ntBASIC3.74□□□□□ -1.81
APOEP02649 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.74□□□□□ -1.81
APOEP02649 RPL23AP73-201ENST00000492507 471 ntBASIC3.74□□□□□ -1.81
APOEP02649 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.74□□□□□ -1.81
APOEP02649 FTH1P24-201ENST00000503502 462 ntBASIC3.74□□□□□ -1.81
APOEP02649 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.74□□□□□ -1.81
APOEP02649 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms