Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.27□□□□□ -1.73
COL2A1P02458 AC005019.1-201ENST00000436455 431 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.27□□□□□ -1.73
COL2A1P02458 AC092809.1-201ENST00000441469 474 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 AL591503.2-201ENST00000442314 1005 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 Z99714.1-201ENST00000450463 807 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 CYCSP35-201ENST00000451978 304 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.27□□□□□ -1.73
COL2A1P02458 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.27□□□□□ -1.73
COL2A1P02458 RPL5P30-201ENST00000465511 891 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 MTCYBP35-201ENST00000503630 1137 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 FTH1P9-201ENST00000513251 355 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.27□□□□□ -1.73
COL2A1P02458 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.27□□□□□ -1.73
COL2A1P02458 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.27□□□□□ -1.73
COL2A1P02458 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.27□□□□□ -1.73
COL2A1P02458 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.27□□□□□ -1.73
COL2A1P02458 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 LINC00557-201ENST00000563184 1279 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 AC006116.10-201ENST00000591836 581 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 AC073111.2-201ENST00000605657 1075 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 AL078595.3-201ENST00000623815 1166 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 AC139792.2-201ENST00000624218 587 ntBASIC4.27□□□□□ -1.73
COL2A1P02458 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
COL2A1P02458 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.27□□□□□ -1.73
COL2A1P02458 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL2A1P02458 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COL2A1P02458 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL2A1P02458 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL2A1P02458 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
COL2A1P02458 AC007685.1-201ENST00000329806 452 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 RNU6-883P-201ENST00000384597 107 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 MIR93-201ENST00000385024 80 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 AL031121.1-201ENST00000406553 254 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 MTHFD2P2-201ENST00000407725 247 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 SETP15-201ENST00000412724 337 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.26□□□□□ -1.73
COL2A1P02458 USP9YP36-201ENST00000424581 829 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 AL590623.1-201ENST00000427864 105 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 USP9YP31-201ENST00000431405 881 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 RPL21P110-201ENST00000433345 446 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 AC004854.1-201ENST00000440356 349 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.26□□□□□ -1.73
COL2A1P02458 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.26□□□□□ -1.73
COL2A1P02458 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL2A1P02458 NPM1P39-201ENST00000449818 867 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.26□□□□□ -1.73
COL2A1P02458 AL445669.2-201ENST00000454425 421 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 MTND2P6-201ENST00000455337 1030 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.26□□□□□ -1.73
COL2A1P02458 SETP1-201ENST00000556014 845 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.26□□□□□ -1.73
COL2A1P02458 AC233266.2-201ENST00000567067 528 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.26□□□□□ -1.73
COL2A1P02458 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
COL2A1P02458 AC022387.2-201ENST00000604050 448 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 AC006077.1-201ENST00000604746 343 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.26□□□□□ -1.73
COL2A1P02458 AC009464.1-201ENST00000615731 469 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 AC004943.3-201ENST00000624116 600 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 AC091905.1-201ENST00000624400 311 ntBASIC4.26□□□□□ -1.73
COL2A1P02458 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.26□□□□□ -1.73
COL2A1P02458 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL2A1P02458 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.26□□□□□ -1.73
COL2A1P02458 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.26□□□□□ -1.73
COL2A1P02458 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL2A1P02458 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.25□□□□□ -1.73
COL2A1P02458 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL2A1P02458 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL2A1P02458 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL2A1P02458 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL2A1P02458 JKAMPP1-201ENST00000413804 919 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.25□□□□□ -1.73
COL2A1P02458 DBIP2-201ENST00000419076 262 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 REREP1Y-201ENST00000422655 198 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 AC005326.1-201ENST00000429197 123 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL2A1P02458 REREP2Y-201ENST00000439103 200 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.25□□□□□ -1.73
COL2A1P02458 Z77249.1-201ENST00000444622 1175 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 YWHAQP9-201ENST00000445891 512 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.25□□□□□ -1.73
COL2A1P02458 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
COL2A1P02458 AC109458.1-201ENST00000508858 316 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.25□□□□□ -1.73
COL2A1P02458 CCNHP1-201ENST00000513311 678 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 AC068339.2-201ENST00000534395 618 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 AC023161.2-201ENST00000551218 780 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 TRAV15-201ENST00000556680 249 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 AC011270.1-201ENST00000558606 583 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 AC015911.5-201ENST00000587076 451 ntBASIC4.25□□□□□ -1.73
COL2A1P02458 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.25□□□□□ -1.73
COL2A1P02458 AC091057.3-201ENST00000602684 733 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms