Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GPC4O75487 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.34□□□□□ -1.71
GPC4O75487 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
GPC4O75487 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GPC4O75487 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GPC4O75487 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GPC4O75487 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.34□□□□□ -1.71
GPC4O75487 ANAPC10P1-201ENST00000395991 556 ntBASIC4.34□□□□□ -1.71
GPC4O75487 TMSB10P2-201ENST00000416049 131 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.34□□□□□ -1.71
GPC4O75487 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.34□□□□□ -1.71
GPC4O75487 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.34□□□□□ -1.71
GPC4O75487 RPL36P19-201ENST00000430744 301 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AL513175.1-201ENST00000431492 780 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.34□□□□□ -1.71
GPC4O75487 GTF2IP7-202ENST00000436677 309 ntBASIC4.34□□□□□ -1.71
GPC4O75487 UBE2V1P3-201ENST00000439651 417 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC093155.1-201ENST00000440164 826 ntBASIC4.34□□□□□ -1.71
GPC4O75487 DHFRP3-201ENST00000455595 559 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.34□□□□□ -1.71
GPC4O75487 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.34□□□□□ -1.71
GPC4O75487 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
GPC4O75487 AC092593.2-201ENST00000513866 913 ntBASIC4.34□□□□□ -1.71
GPC4O75487 RNA5SP135-201ENST00000517019 125 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.34□□□□□ -1.71
GPC4O75487 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.34□□□□□ -1.71
GPC4O75487 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.34□□□□□ -1.71
GPC4O75487 AP001207.1-201ENST00000524051 481 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC069240.1-201ENST00000548774 375 ntBASIC4.34□□□□□ -1.71
GPC4O75487 CR383656.6-201ENST00000550518 394 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC068831.4-201ENST00000556118 109 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.34□□□□□ -1.71
GPC4O75487 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.34□□□□□ -1.71
GPC4O75487 MIR3912-201ENST00000577566 105 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.34□□□□□ -1.71
GPC4O75487 MIR4330-201ENST00000579077 105 ntBASIC4.34□□□□□ -1.71
GPC4O75487 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.34□□□□□ -1.71
GPC4O75487 AC079587.1-201ENST00000603846 277 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC013244.3-201ENST00000605614 388 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC063944.3-201ENST00000609969 533 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AC105227.2-201ENST00000615075 605 ntBASIC4.34□□□□□ -1.71
GPC4O75487 RN7SL722P-201ENST00000617780 284 ntBASIC4.34□□□□□ -1.71
GPC4O75487 RN7SL565P-201ENST00000618246 284 ntBASIC4.34□□□□□ -1.71
GPC4O75487 AF001550.2-201ENST00000636643 217 ntBASIC4.34□□□□□ -1.71
GPC4O75487 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
GPC4O75487 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GPC4O75487 OR11H5P-202ENST00000641612 1325 ntBASIC4.34□□□□□ -1.71
GPC4O75487 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GPC4O75487 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.34□□□□□ -1.71
GPC4O75487 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
GPC4O75487 XPOTP1-201ENST00000443317 2398 ntBASIC4.34□□□□□ -1.72
GPC4O75487 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
GPC4O75487 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.34□□□□□ -1.72
GPC4O75487 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
GPC4O75487 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
GPC4O75487 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.33□□□□□ -1.72
GPC4O75487 AC107081.3-201ENST00000612715 2034 ntBASIC4.33□□□□□ -1.72
GPC4O75487 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GPC4O75487 IQCB2P-201ENST00000401788 1633 ntBASIC4.33□□□□□ -1.72
GPC4O75487 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
GPC4O75487 MFSD8-242ENST00000641690 4199 ntBASIC4.33□□□□□ -1.72
GPC4O75487 HMGB1P5-201ENST00000255320 642 ntBASIC4.33□□□□□ -1.72
GPC4O75487 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GPC4O75487 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GPC4O75487 SNORD116.1-201ENST00000365628 92 ntBASIC4.33□□□□□ -1.72
GPC4O75487 SNORD65.1-201ENST00000390889 71 ntBASIC4.33□□□□□ -1.72
GPC4O75487 DSTNP4-201ENST00000399472 474 ntBASIC4.33□□□□□ -1.72
GPC4O75487 AL139098.1-201ENST00000407291 389 ntBASIC4.33□□□□□ -1.72
GPC4O75487 ELOCP19-201ENST00000411919 318 ntBASIC4.33□□□□□ -1.72
GPC4O75487 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.33□□□□□ -1.72
GPC4O75487 RPS23P10-201ENST00000416185 486 ntBASIC4.33□□□□□ -1.72
GPC4O75487 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.33□□□□□ -1.72
GPC4O75487 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.33□□□□□ -1.72
GPC4O75487 MTCO1P54-201ENST00000430139 712 ntBASIC4.33□□□□□ -1.72
GPC4O75487 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.33□□□□□ -1.72
GPC4O75487 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.33□□□□□ -1.72
GPC4O75487 Z99714.1-201ENST00000450463 807 ntBASIC4.33□□□□□ -1.72
GPC4O75487 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.33□□□□□ -1.72
GPC4O75487 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.33□□□□□ -1.72
GPC4O75487 NDUFA12P1-201ENST00000455914 406 ntBASIC4.33□□□□□ -1.72
GPC4O75487 snoU13.7-201ENST00000459220 104 ntBASIC4.33□□□□□ -1.72
GPC4O75487 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.33□□□□□ -1.72
GPC4O75487 RN7SL738P-201ENST00000470264 297 ntBASIC4.33□□□□□ -1.72
GPC4O75487 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.33□□□□□ -1.72
GPC4O75487 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.33□□□□□ -1.72
GPC4O75487 AC113347.3-201ENST00000509113 148 ntBASIC4.33□□□□□ -1.72
GPC4O75487 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.33□□□□□ -1.72
GPC4O75487 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.33□□□□□ -1.72
GPC4O75487 RNU6-311P-201ENST00000516224 102 ntBASIC4.33□□□□□ -1.72
GPC4O75487 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.33□□□□□ -1.72
GPC4O75487 SOD1P3-201ENST00000518682 454 ntBASIC4.33□□□□□ -1.72
GPC4O75487 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.33□□□□□ -1.72
GPC4O75487 AC090819.1-201ENST00000523800 1111 ntBASIC4.33□□□□□ -1.72
GPC4O75487 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GPC4O75487 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.33□□□□□ -1.72
GPC4O75487 PHBP17-201ENST00000528576 541 ntBASIC4.33□□□□□ -1.72
GPC4O75487 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.33□□□□□ -1.72
GPC4O75487 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.33□□□□□ -1.72
GPC4O75487 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.33□□□□□ -1.72
GPC4O75487 MTATP6P24-201ENST00000576835 677 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms