Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX3O60493 AC048346.1-201ENST00000510247 144 ntBASIC3.99□□□□□ -1.77
SNX3O60493 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX3O60493 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX3O60493 RNU6-488P-201ENST00000515918 99 ntBASIC3.99□□□□□ -1.77
SNX3O60493 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX3O60493 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SNX3O60493 AP001372.4-201ENST00000524889 472 ntBASIC3.99□□□□□ -1.77
SNX3O60493 OR4C2P-201ENST00000530855 1064 ntBASIC3.99□□□□□ -1.77
SNX3O60493 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.99□□□□□ -1.77
SNX3O60493 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX3O60493 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.99□□□□□ -1.77
SNX3O60493 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.99□□□□□ -1.77
SNX3O60493 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX3O60493 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX3O60493 AC113194.1-201ENST00000606037 500 ntBASIC3.99□□□□□ -1.77
SNX3O60493 AC017076.1-201ENST00000607613 578 ntBASIC3.99□□□□□ -1.77
SNX3O60493 AC099676.1-201ENST00000608886 657 ntBASIC3.99□□□□□ -1.77
SNX3O60493 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX3O60493 AL121895.2-201ENST00000619558 447 ntBASIC3.99□□□□□ -1.77
SNX3O60493 AC000123.2-201ENST00000623124 461 ntBASIC3.99□□□□□ -1.77
SNX3O60493 AL078595.3-201ENST00000623815 1166 ntBASIC3.99□□□□□ -1.77
SNX3O60493 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SNX3O60493 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SNX3O60493 MFSD8-245ENST00000641743 948 ntBASIC3.99□□□□□ -1.77
SNX3O60493 ZNF663P-202ENST00000641770 1131 ntBASIC3.99□□□□□ -1.77
SNX3O60493 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX3O60493 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX3O60493 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX3O60493 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SNX3O60493 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.99□□□□□ -1.77
SNX3O60493 AC107081.3-201ENST00000612715 2034 ntBASIC3.99□□□□□ -1.77
SNX3O60493 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SNX3O60493 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX3O60493 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX3O60493 DCAF13P3-201ENST00000561147 1334 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AL049555.1-201ENST00000562834 1933 ntBASIC3.98□□□□□ -1.77
SNX3O60493 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SNX3O60493 RNU6-707P-201ENST00000364647 95 ntBASIC3.98□□□□□ -1.77
SNX3O60493 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
SNX3O60493 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX3O60493 DSTNP4-201ENST00000399472 474 ntBASIC3.98□□□□□ -1.77
SNX3O60493 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
SNX3O60493 AL049697.2-201ENST00000403708 294 ntBASIC3.98□□□□□ -1.77
SNX3O60493 RNU2-21P-201ENST00000410368 188 ntBASIC3.98□□□□□ -1.77
SNX3O60493 TMSB10P2-201ENST00000416049 131 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC009237.2-201ENST00000421358 284 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AL355433.1-201ENST00000422804 300 ntBASIC3.98□□□□□ -1.77
SNX3O60493 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX3O60493 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX3O60493 HMGB3P6-201ENST00000444896 598 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX3O60493 AC112492.1-201ENST00000449607 712 ntBASIC3.98□□□□□ -1.77
SNX3O60493 snoU13.7-201ENST00000459220 104 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC005532.2-201ENST00000467154 373 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC069528.1-202ENST00000482888 637 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC005351.1-201ENST00000511152 786 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX3O60493 SOD1P3-201ENST00000518682 454 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX3O60493 MTND2P32-201ENST00000521584 1038 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC022790.1-201ENST00000522872 204 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.98□□□□□ -1.77
SNX3O60493 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX3O60493 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX3O60493 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX3O60493 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.98□□□□□ -1.77
SNX3O60493 AL121576.1-201ENST00000556055 276 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC009101.1-201ENST00000568135 242 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AL031320.1-201ENST00000604177 357 ntBASIC3.98□□□□□ -1.77
SNX3O60493 BRDTP1-201ENST00000605735 677 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC026790.2-201ENST00000606282 430 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AL121612.2-201ENST00000612261 482 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC105227.2-201ENST00000615075 605 ntBASIC3.98□□□□□ -1.77
SNX3O60493 AC124312.6-202ENST00000623624 418 ntBASIC3.98□□□□□ -1.77
SNX3O60493 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX3O60493 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.98□□□□□ -1.77
SNX3O60493 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
SNX3O60493 TNPO1P3-201ENST00000436471 2662 ntBASIC3.98□□□□□ -1.77
SNX3O60493 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SNX3O60493 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
SNX3O60493 SAGE2P-201ENST00000420011 2126 ntBASIC3.98□□□□□ -1.77
SNX3O60493 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SNX3O60493 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.98□□□□□ -1.77
SNX3O60493 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SNX3O60493 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.97□□□□□ -1.77
SNX3O60493 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX3O60493 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX3O60493 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX3O60493 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SNX3O60493 MTCO1P11-201ENST00000429111 1528 ntBASIC3.97□□□□□ -1.77
SNX3O60493 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.97□□□□□ -1.77
SNX3O60493 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
SNX3O60493 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SNX3O60493 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX3O60493 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SNX3O60493 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SNX3O60493 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
SNX3O60493 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SNX3O60493 HSPE1P8-201ENST00000406997 288 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms