Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZIC3O60481 PHKBP1-201ENST00000450951 1951 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ZIC3O60481 OR56B2P-202ENST00000641377 2453 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.13□□□□□ -1.75
ZIC3O60481 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.13□□□□□ -1.75
ZIC3O60481 RNU1-32P-201ENST00000363937 159 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 RNU6-444P-201ENST00000383988 108 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 MIR129-1-201ENST00000384972 72 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ZIC3O60481 SNORA68.2-201ENST00000391263 128 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 HNRNPDP2-201ENST00000406475 478 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 RPS27AP7-201ENST00000422792 455 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.13□□□□□ -1.75
ZIC3O60481 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.13□□□□□ -1.75
ZIC3O60481 B3GNT2P1-201ENST00000434960 952 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.13□□□□□ -1.75
ZIC3O60481 YWHAZP8-201ENST00000436935 731 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.13□□□□□ -1.75
ZIC3O60481 RPL23AP93-201ENST00000440847 484 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 AC118469.1-201ENST00000442943 488 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 H2AFZP6-201ENST00000444403 394 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 MTND2P4-201ENST00000445034 1004 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.13□□□□□ -1.75
ZIC3O60481 AC073387.1-201ENST00000453261 709 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ZIC3O60481 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.13□□□□□ -1.75
ZIC3O60481 RNA5SP103-201ENST00000459503 118 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.13□□□□□ -1.75
ZIC3O60481 SYPL1P1-201ENST00000473622 768 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 RPL30P11-201ENST00000495304 339 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 SETP14-201ENST00000497538 873 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.13□□□□□ -1.75
ZIC3O60481 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.13□□□□□ -1.75
ZIC3O60481 HMGB3P13-201ENST00000511263 607 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.13□□□□□ -1.75
ZIC3O60481 MTCO1P49-201ENST00000523429 802 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.13□□□□□ -1.75
ZIC3O60481 AP000790.1-201ENST00000528891 737 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ZIC3O60481 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.13□□□□□ -1.75
ZIC3O60481 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
ZIC3O60481 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.13□□□□□ -1.75
ZIC3O60481 AC090515.3-201ENST00000560431 315 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 MIR4715-201ENST00000584117 79 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.13□□□□□ -1.75
ZIC3O60481 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.13□□□□□ -1.75
ZIC3O60481 AL163642.2-201ENST00000604722 1019 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 AC018714.1-201ENST00000605028 208 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 IMMP1LP1-201ENST00000605170 488 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 AC091946.2-201ENST00000606105 291 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 AC084782.3-201ENST00000612282 578 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 AL133243.1-201ENST00000614487 366 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 AL136981.2-201ENST00000617319 734 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 AC120349.2-201ENST00000625002 298 ntBASIC4.13□□□□□ -1.75
ZIC3O60481 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZIC3O60481 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.13□□□□□ -1.75
ZIC3O60481 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
ZIC3O60481 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZIC3O60481 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
ZIC3O60481 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ZIC3O60481 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
ZIC3O60481 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
ZIC3O60481 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
ZIC3O60481 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZIC3O60481 AC107081.3-201ENST00000612715 2034 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZIC3O60481 AP000542.2-201ENST00000623199 6179 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.12□□□□□ -1.75
ZIC3O60481 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.12□□□□□ -1.75
ZIC3O60481 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ZIC3O60481 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.12□□□□□ -1.75
ZIC3O60481 Y_RNA.25-201ENST00000362528 102 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 RNU6-216P-201ENST00000363282 104 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 SNORD116-9-201ENST00000384000 95 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 SNORD116-3-201ENST00000384287 95 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 SNORD116-7-201ENST00000384404 95 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 SNORD116-5-201ENST00000384462 95 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ZIC3O60481 RPL31P52-201ENST00000407532 367 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZIC3O60481 RN7SKP216-201ENST00000411050 312 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 Y_RNA.625-201ENST00000411256 107 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 PIGPP2-201ENST00000411569 458 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 AL807761.1-201ENST00000417622 171 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 TIMM9P2-201ENST00000419324 266 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 RPL36AP10-201ENST00000421785 322 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.12□□□□□ -1.75
ZIC3O60481 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.12□□□□□ -1.75
ZIC3O60481 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.12□□□□□ -1.75
ZIC3O60481 GSTA7P-201ENST00000438425 448 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.12□□□□□ -1.75
ZIC3O60481 AC239809.1-201ENST00000450470 217 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 AC006463.2-201ENST00000473326 348 ntBASIC4.12□□□□□ -1.75
ZIC3O60481 RPL30P6-201ENST00000475925 342 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms