Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC062016.2-201ENST00000420950 676 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 Z74021.1-201ENST00000423610 407 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 AL022400.1-201ENST00000423946 935 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXN3O00409 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXN3O00409 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.99□□□□□ -1.61
FOXN3O00409 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FOXN3O00409 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FOXN3O00409 MTCO1P48-201ENST00000448024 1096 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 RPL7P31-201ENST00000450192 724 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXN3O00409 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXN3O00409 AC092757.1-201ENST00000467293 467 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 RPS4XP18-201ENST00000495480 763 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 MTCYBP17-201ENST00000503579 789 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 NDUFA5P12-201ENST00000503796 343 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 AC090071.1-201ENST00000507713 644 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 NDUFB5P1-201ENST00000508134 564 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FOXN3O00409 RNU2-30P-201ENST00000516209 141 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 RNU6-759P-201ENST00000516740 103 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXN3O00409 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.99□□□□□ -1.61
FOXN3O00409 DEFB109D-201ENST00000529497 240 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXN3O00409 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXN3O00409 EDDM3DP-201ENST00000554692 434 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.99□□□□□ -1.61
FOXN3O00409 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXN3O00409 AC012435.1-202ENST00000568772 240 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 MIR3667-201ENST00000581025 74 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 MIR4512-201ENST00000583257 77 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 MIR4999-201ENST00000585029 91 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.99□□□□□ -1.61
FOXN3O00409 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.99□□□□□ -1.61
FOXN3O00409 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.99□□□□□ -1.61
FOXN3O00409 AC015726.1-201ENST00000602353 681 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.99□□□□□ -1.61
FOXN3O00409 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXN3O00409 AC007390.2-201ENST00000606229 3803 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 AL136981.2-201ENST00000617319 734 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 AC005086.4-201ENST00000623065 213 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 AC000123.2-201ENST00000623124 461 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.99□□□□□ -1.61
FOXN3O00409 MIR3974-201ENST00000637126 96 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
FOXN3O00409 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.99□□□□□ -1.61
FOXN3O00409 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
FOXN3O00409 AC131971.1-201ENST00000332881 1482 ntBASIC4.99□□□□□ -1.61
FOXN3O00409 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
FOXN3O00409 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
FOXN3O00409 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FOXN3O00409 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.98□□□□□ -1.61
FOXN3O00409 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
FOXN3O00409 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.98□□□□□ -1.61
FOXN3O00409 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXN3O00409 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
FOXN3O00409 RNU6-1279P-201ENST00000383917 103 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AL645733.1-201ENST00000402250 217 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXN3O00409 MIR1284-201ENST00000408337 120 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 CEACAMP8-201ENST00000413902 580 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN3O00409 AC016907.1-201ENST00000419483 435 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AC096632.1-201ENST00000427395 310 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 VN1R108P-201ENST00000431580 830 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 VN1R54P-201ENST00000435210 1049 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXN3O00409 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN3O00409 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN3O00409 RSL24D1P3-201ENST00000449255 495 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXN3O00409 AL445669.2-201ENST00000454425 421 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 RPS3AP41-201ENST00000462701 778 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 BZW1P2-201ENST00000473537 826 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AC093270.2-201ENST00000486157 792 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN3O00409 AC104685.1-201ENST00000502445 371 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AC147055.4-201ENST00000504399 745 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN3O00409 RNU6-232P-201ENST00000517144 64 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN3O00409 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN3O00409 AP000790.1-201ENST00000528891 737 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AP000676.2-201ENST00000529711 301 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.98□□□□□ -1.61
FOXN3O00409 CYCSP28-201ENST00000534284 321 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXN3O00409 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.98□□□□□ -1.61
FOXN3O00409 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXN3O00409 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.98□□□□□ -1.61
FOXN3O00409 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXN3O00409 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.98□□□□□ -1.61
FOXN3O00409 AC073091.2-201ENST00000603205 907 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AL163642.2-201ENST00000604722 1019 ntBASIC4.98□□□□□ -1.61
FOXN3O00409 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms