Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL391807.1-203ENST00000604392 2365 ntBASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 MIR2861-201ENST00000636310 90 ntBASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL25A1Q9BXS0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 RPS2P28-201ENST00000314255 741 ntBASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 AC002347.1-201ENST00000569543 541 ntBASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL25A1Q9BXS0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 AL160286.2-201ENST00000567150 934 ntBASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 AP002472.1-201ENST00000577490 586 ntBASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 MTDHP5-201ENST00000598980 586 ntBASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
COL25A1Q9BXS0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 AC018553.1-201ENST00000616682 1458 ntBASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 KRT8P17-201ENST00000453110 1448 ntBASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.6■□□□□ 0.73
COL25A1Q9BXS0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
COL25A1Q9BXS0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms