Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
XRN1Q8IZH2 KRT18P1-202ENST00000452408 1331 ntBASIC26.88■■□□□ 1.89
XRN1Q8IZH2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
XRN1Q8IZH2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
XRN1Q8IZH2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 AC009078.2-202ENST00000463353 338 ntBASIC26.87■■□□□ 1.89
XRN1Q8IZH2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 GOLGA2P11-201ENST00000562660 1621 ntBASIC26.87■■□□□ 1.89
XRN1Q8IZH2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC26.87■■□□□ 1.89
XRN1Q8IZH2 GPAT2P1-201ENST00000444924 1672 ntBASIC26.87■■□□□ 1.89
XRN1Q8IZH2 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 CHCHD2P8-201ENST00000429873 447 ntBASIC26.86■■□□□ 1.89
XRN1Q8IZH2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 BX276092.5-203ENST00000456199 560 ntBASIC26.86■■□□□ 1.89
XRN1Q8IZH2 SEC1P-202ENST00000473944 940 ntBASIC26.86■■□□□ 1.89
XRN1Q8IZH2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
XRN1Q8IZH2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 AL845331.1-201ENST00000424978 1190 ntBASIC26.85■■□□□ 1.89
XRN1Q8IZH2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 AP002414.4-201ENST00000589764 1148 ntBASIC26.85■■□□□ 1.89
XRN1Q8IZH2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 AC079834.2-201ENST00000609776 1949 ntBASIC26.85■■□□□ 1.89
XRN1Q8IZH2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 HLA-F-220ENST00000434407 884 ntBASIC26.85■■□□□ 1.89
XRN1Q8IZH2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC26.85■■□□□ 1.89
XRN1Q8IZH2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC26.84■■□□□ 1.89
XRN1Q8IZH2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC26.84■■□□□ 1.89
XRN1Q8IZH2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.84■■□□□ 1.89
XRN1Q8IZH2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
XRN1Q8IZH2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
XRN1Q8IZH2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC26.84■■□□□ 1.89
XRN1Q8IZH2 TSPY12P-201ENST00000421279 868 ntBASIC26.84■■□□□ 1.89
XRN1Q8IZH2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
XRN1Q8IZH2 SLC25A6P4-201ENST00000586535 553 ntBASIC26.84■■□□□ 1.89
XRN1Q8IZH2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC26.84■■□□□ 1.89
XRN1Q8IZH2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC26.84■■□□□ 1.89
XRN1Q8IZH2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
XRN1Q8IZH2 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
XRN1Q8IZH2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
XRN1Q8IZH2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC26.83■■□□□ 1.89
XRN1Q8IZH2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC26.83■■□□□ 1.89
XRN1Q8IZH2 AC104692.2-201ENST00000603054 253 ntBASIC26.83■■□□□ 1.89
XRN1Q8IZH2 AL162741.1-201ENST00000565563 1558 ntBASIC26.83■■□□□ 1.89
XRN1Q8IZH2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
XRN1Q8IZH2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.88
XRN1Q8IZH2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 AC079602.3-201ENST00000623931 403 ntBASIC26.82■■□□□ 1.88
XRN1Q8IZH2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC26.82■■□□□ 1.88
XRN1Q8IZH2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms