Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rfx6Q8C7R7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rfx6Q8C7R7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rfx6Q8C7R7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx6Q8C7R7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx6Q8C7R7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx6Q8C7R7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx6Q8C7R7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx6Q8C7R7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx6Q8C7R7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.77■□□□□ 0.28
Rfx6Q8C7R7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rfx6Q8C7R7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfx6Q8C7R7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rfx6Q8C7R7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rfx6Q8C7R7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfx6Q8C7R7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfx6Q8C7R7 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfx6Q8C7R7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Rfx6Q8C7R7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rfx6Q8C7R7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rfx6Q8C7R7 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Rfx6Q8C7R7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfx6Q8C7R7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rfx6Q8C7R7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rfx6Q8C7R7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rfx6Q8C7R7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rfx6Q8C7R7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rfx6Q8C7R7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rfx6Q8C7R7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rfx6Q8C7R7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms