Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Gm10231-201ENSMUST00000181584 441 ntBASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Gm7977-201ENSMUST00000193787 748 ntBASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Gm10175-202ENSMUST00000208752 441 ntBASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trerf1Q8BXJ2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Il3ra-202ENSMUST00000223589 738 ntBASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trerf1Q8BXJ2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trerf1Q8BXJ2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trerf1Q8BXJ2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trerf1Q8BXJ2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trerf1Q8BXJ2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.38■□□□□ 0.37
Trerf1Q8BXJ2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trerf1Q8BXJ2 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms