Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.49■□□□□ 0.55
Abcf1Q6P542 Odf3b-204ENSMUST00000227834 930 ntBASIC18.49■□□□□ 0.55
Abcf1Q6P542 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Abcf1Q6P542 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.48■□□□□ 0.55
Abcf1Q6P542 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Mir7071-201ENSMUST00000184847 69 ntBASIC18.48■□□□□ 0.55
Abcf1Q6P542 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.48■□□□□ 0.55
Abcf1Q6P542 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Abcf1Q6P542 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Abcf1Q6P542 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Abcf1Q6P542 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Gm21814-202ENSMUST00000203277 873 ntBASIC18.46■□□□□ 0.55
Abcf1Q6P542 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Abcf1Q6P542 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Abcf1Q6P542 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Gm12085-201ENSMUST00000119263 940 ntBASIC18.45■□□□□ 0.54
Abcf1Q6P542 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.45■□□□□ 0.54
Abcf1Q6P542 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.45■□□□□ 0.54
Abcf1Q6P542 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Abcf1Q6P542 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms