Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Gm17661-201ENSMUST00000170317 270 ntBASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Gm38027-201ENSMUST00000192315 235 ntBASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav7-2Q5R1I3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav7-2Q5R1I3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Gm12085-201ENSMUST00000119263 940 ntBASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Gm9731-201ENSMUST00000209480 747 ntBASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav7-2Q5R1I3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav7-2Q5R1I3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms