Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trim80Q3V061 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim80Q3V061 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim80Q3V061 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Trim80Q3V061 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim80Q3V061 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim80Q3V061 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim80Q3V061 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim80Q3V061 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim80Q3V061 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim80Q3V061 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim80Q3V061 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim80Q3V061 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim80Q3V061 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim80Q3V061 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Trim80Q3V061 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim80Q3V061 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim80Q3V061 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim80Q3V061 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim80Q3V061 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trim80Q3V061 Gm6433-201ENSMUST00000118634 875 ntBASIC17.07■□□□□ 0.32
Trim80Q3V061 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim80Q3V061 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trim80Q3V061 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim80Q3V061 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim80Q3V061 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Trim80Q3V061 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Trim80Q3V061 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim80Q3V061 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Gm11927-201ENSMUST00000118472 759 ntBASIC17.06■□□□□ 0.32
Trim80Q3V061 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim80Q3V061 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.06■□□□□ 0.32
Trim80Q3V061 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Trim80Q3V061 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim80Q3V061 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim80Q3V061 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim80Q3V061 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trim80Q3V061 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim80Q3V061 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim80Q3V061 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim80Q3V061 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim80Q3V061 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.05■□□□□ 0.32
Trim80Q3V061 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim80Q3V061 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.05■□□□□ 0.32
Trim80Q3V061 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim80Q3V061 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim80Q3V061 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim80Q3V061 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms