Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Xcl1P47993 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Xcl1P47993 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Xcl1P47993 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Xcl1P47993 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Gm27032-201ENSMUST00000183124 1116 ntBASIC10.8□□□□□ -0.68
Xcl1P47993 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC10.8□□□□□ -0.68
Xcl1P47993 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC10.8□□□□□ -0.68
Xcl1P47993 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Xcl1P47993 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Xcl1P47993 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Xcl1P47993 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Xcl1P47993 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Xcl1P47993 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Xcl1P47993 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC10.79□□□□□ -0.68
Xcl1P47993 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC10.79□□□□□ -0.68
Xcl1P47993 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC10.79□□□□□ -0.68
Xcl1P47993 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Xcl1P47993 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC10.79□□□□□ -0.68
Xcl1P47993 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Xcl1P47993 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC10.79□□□□□ -0.68
Xcl1P47993 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Gm43352-201ENSMUST00000196419 3065 ntBASIC10.79□□□□□ -0.68
Xcl1P47993 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Xcl1P47993 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Xcl1P47993 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC10.78□□□□□ -0.68
Xcl1P47993 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Xcl1P47993 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Xcl1P47993 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Xcl1P47993 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Xcl1P47993 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
Xcl1P47993 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Mir8112-201ENSMUST00000184382 131 ntBASIC10.78□□□□□ -0.68
Xcl1P47993 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Xcl1P47993 Gm40881-201ENSMUST00000223397 166 ntBASIC10.78□□□□□ -0.68
Xcl1P47993 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Xcl1P47993 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Xcl1P47993 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms