Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RB1P06400 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RB1P06400 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RB1P06400 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RB1P06400 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.45■□□□□ 0.86
RB1P06400 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RB1P06400 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RB1P06400 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RB1P06400 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.45■□□□□ 0.86
RB1P06400 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.45■□□□□ 0.86
RB1P06400 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.45■□□□□ 0.86
RB1P06400 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.45■□□□□ 0.86
RB1P06400 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.45■□□□□ 0.86
RB1P06400 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RB1P06400 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RB1P06400 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.45■□□□□ 0.86
RB1P06400 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
RB1P06400 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RB1P06400 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RB1P06400 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RB1P06400 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RB1P06400 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.44■□□□□ 0.86
RB1P06400 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RB1P06400 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RB1P06400 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.44■□□□□ 0.86
RB1P06400 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.44■□□□□ 0.86
RB1P06400 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.44■□□□□ 0.86
RB1P06400 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.44■□□□□ 0.86
RB1P06400 AL645929.1-201ENST00000420084 975 ntBASIC20.44■□□□□ 0.86
RB1P06400 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.44■□□□□ 0.86
RB1P06400 AC034232.1-201ENST00000506026 1064 ntBASIC20.44■□□□□ 0.86
RB1P06400 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RB1P06400 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RB1P06400 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RB1P06400 AC092329.2-201ENST00000598402 547 ntBASIC20.44■□□□□ 0.86
RB1P06400 AC092119.3-201ENST00000612618 583 ntBASIC20.44■□□□□ 0.86
RB1P06400 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RB1P06400 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RB1P06400 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RB1P06400 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RB1P06400 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RB1P06400 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.44■□□□□ 0.86
RB1P06400 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RB1P06400 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RB1P06400 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RB1P06400 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RB1P06400 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RB1P06400 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RB1P06400 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RB1P06400 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.43■□□□□ 0.86
RB1P06400 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RB1P06400 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RB1P06400 TSPY21P-201ENST00000433481 731 ntBASIC20.43■□□□□ 0.86
RB1P06400 TSPY23P-201ENST00000440136 739 ntBASIC20.43■□□□□ 0.86
RB1P06400 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.43■□□□□ 0.86
RB1P06400 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.43■□□□□ 0.86
RB1P06400 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RB1P06400 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
RB1P06400 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RB1P06400 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RB1P06400 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
RB1P06400 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RB1P06400 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
RB1P06400 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RB1P06400 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RB1P06400 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.42■□□□□ 0.86
RB1P06400 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.42■□□□□ 0.86
RB1P06400 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RB1P06400 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RB1P06400 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RB1P06400 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RB1P06400 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RB1P06400 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.42■□□□□ 0.86
RB1P06400 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.42■□□□□ 0.86
RB1P06400 PRELID1P1-202ENST00000567272 903 ntBASIC20.42■□□□□ 0.86
RB1P06400 RN7SL510P-201ENST00000581311 263 ntBASIC20.42■□□□□ 0.86
RB1P06400 CR769767.2-201ENST00000622735 460 ntBASIC20.42■□□□□ 0.86
RB1P06400 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RB1P06400 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.42■□□□□ 0.86
RB1P06400 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.42■□□□□ 0.86
RB1P06400 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.42■□□□□ 0.86
RB1P06400 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.42■□□□□ 0.86
RB1P06400 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RB1P06400 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.42■□□□□ 0.86
RB1P06400 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.41■□□□□ 0.86
RB1P06400 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.41■□□□□ 0.86
RB1P06400 PKD1P6-201ENST00000343738 4769 ntBASIC20.41■□□□□ 0.86
RB1P06400 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RB1P06400 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RB1P06400 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RB1P06400 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.41■□□□□ 0.86
RB1P06400 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.41■□□□□ 0.86
RB1P06400 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.41■□□□□ 0.86
RB1P06400 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RB1P06400 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
RB1P06400 RASA4DP-201ENST00000460726 1199 ntBASIC20.41■□□□□ 0.86
RB1P06400 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.41■□□□□ 0.86
RB1P06400 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
RB1P06400 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RB1P06400 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms